Flavobacterium psychrophilum JIP02/86: FP1979
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Entry
FP1979 CDS
T00548
Symbol
miaB
Name
(GenBank) Probable TRNA-i(6)A37 modification enzyme MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fps03016
]
FP1979 (miaB)
Enzymes [BR:
fps01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
FP1979 (miaB)
Transfer RNA biogenesis [BR:
fps03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
FP1979 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
CAL44043
UniProt:
A6H119
LinkDB
All DBs
Position
1834522..1835967
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AA seq
481 aa
AA seq
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MEKIIEESKQGGSLILENKPENTKKLFIESYGCAMNFSDSEIVASILSGNGYNTTNVLEE
ADLVLVNTCSIRDKAEQTIRKRLEKYNAVKRINPKMKVGVLGCMAERLKDKFLEEEKIVD
LVVGPDAYKDLPNLLNEVEEGRDAINVILSKDETYGDISPVRLMSNGITALVAITRGCDN
MCTFCVVPFTRGRERSREPQSIMAEIQDLWHKGFKEITLLGQNVDSYLWYGGGLKKDFTN
ASEIQKATAVDFDQLLEMVAVGFPKMRIRFSTSNPQDMHESILHVMAKHSNICKHIHLPV
QSGSNRILKEMNRLHTREEYMILIDKIRAIIPNASISQDMIAGFPTETEEDHQDTISLMQ
YVKYNFGYMYSYSERPGTLAGRKMKDDVSDEIKARRLQEIVDLQQKHAWWRSEDFIGQTV
EVLVEKVSKKSTEEFSGRNSQSITVVFPKEHYKIGDFVNVKIKSCTSGTLKGEAVGYSEM
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagattatcgaagaaagcaaacaaggcggaagtcttattttagaaaacaaacca
gaaaataccaagaaacttttcatagagagttacggttgtgcgatgaatttttcggactcg
gaaattgtagcctctatactttctggaaatggctataatactacaaatgtactggaagaa
gccgatttggttttggtaaatacctgctctattcgtgataaagcagaacaaaccattcgc
aagcgcttagagaaatataatgccgtaaaacgcattaaccccaaaatgaaagtaggcgtt
ttaggctgtatggccgaacgtttgaaagacaaatttctggaagaagaaaaaattgtagat
ctagtcgtggggcctgatgcttataaagatttgcccaatttattgaacgaagttgaagaa
ggtcgtgatgccataaatgtgattttgagtaaagatgaaacatatggcgatatttctccc
gttagattgatgagcaacggaattacagccctagttgcaattactcgtggttgcgataat
atgtgtaccttttgcgtagtgccctttactcgtggccgcgaacgcagccgtgaaccgcaa
agcatcatggcagaaattcaggatttgtggcacaaagggtttaaagaaattacgctttta
ggccagaatgtagacagttacctttggtatggtggcggattgaaaaaagatttcacaaat
gctagcgaaatacaaaaagcgactgctgtcgattttgaccaattattagaaatggtggcg
gttggttttcccaaaatgagaattcgtttttcgacctctaatccgcaagatatgcacgaa
agtatattacatgttatggctaaacatagcaacatctgcaaacacattcacctacccgtt
caatcaggaagcaatcgtatattaaaagaaatgaatcgcttgcacacgcgtgaagagtat
atgattttgattgataaaattagagcaattattccaaacgcatcgatctcgcaagacatg
attgctggttttcctaccgaaacagaagaagatcatcaagacactataagtttgatgcaa
tatgtaaagtataatttcggttatatgtattcgtattcagaacgcccaggaacattggca
ggtcgcaaaatgaaagacgatgtttctgatgaaataaaagccagaagattgcaagaaatt
gtcgatttgcaacaaaaacacgcttggtggcgaagtgaagattttataggtcaaactgta
gaagttttagtagaaaaagtatctaaaaaatcgaccgaagaattttcagggaggaattcg
caaagcattacggtcgtttttcctaaagagcattataagattggagattttgtaaatgta
aagattaaaagttgtacaagcggaactttaaaaggagaagccgttggatattctgaaatg
aattaa
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