Flavobacterium psychrophilum JIP02/86: FP1985
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Entry
FP1985 CDS
T00548
Symbol
groL
Name
(GenBank) 60 kDa chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Pathway
fps03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FP1985 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fps03019
]
FP1985 (groL)
03110 Chaperones and folding catalysts [BR:
fps03110
]
FP1985 (groL)
03029 Mitochondrial biogenesis [BR:
fps03029
]
FP1985 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
fps04147
]
FP1985 (groL)
Enzymes [BR:
fps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FP1985 (groL)
Messenger RNA biogenesis [BR:
fps03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FP1985 (groL)
Chaperones and folding catalysts [BR:
fps03110
]
Heat shock proteins
HSP60 / Chaperonin
FP1985 (groL)
Mitochondrial biogenesis [BR:
fps03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FP1985 (groL)
Exosome [BR:
fps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FP1985 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FP1985 (groL)
Exosomal proteins of breast cancer cells
FP1985 (groL)
Exosomal proteins of colorectal cancer cells
FP1985 (groL)
Exosomal proteins of bladder cancer cells
FP1985 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
CAL44049
UniProt:
A6H125
LinkDB
All DBs
Position
1840460..1842088
Genome browser
AA seq
542 aa
AA seq
DB search
MAKNIKFDIEARDGLKRGVDALANAVKVTLGPKGRNVIIGKSFGGPTVTKDGVTVAKEIE
LQDPLENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVAAGANPMDLKRGID
KAVEAIVADLTKQAKVVGSDSEKIKQIASISANNDEVIGELIANAFAKVGKEGVITVEEA
KGTDTYVDVVEGMQFDRGYLSPYFVTNPEKMDAELENPYILLYDKKVSSLKELLPVLEPV
AQSGKPLLIIAEDVDGEALSTLVVNKLRGALKIAAVKAPGFGDRRKAMLEDIAILTGGTV
ISEERGFTLENTTIEMLGTAKRVTIDKDNTTIVSGAGEADMIKNRVNQIKGQMEASTSDY
DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALL
RAKNVLKDIKADNADEATGIQIVSRAVEAPLRTIVENAGLEGSVVVAKVAEGSGDFGYNA
KTDEYVDMLKAGIIDPKKVTRVALENAASVAGMILTTECALVEIKEENAGGGQMGGGMPG
MM
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatataaaatttgatatagaagcacgtgacggattaaaacgtggcgtagac
gcattagcaaacgcagtaaaagtaacacttggaccaaaaggacgtaatgtgattattgga
aaatcatttggcggaccaacagtcaccaaagacggagttacagtggccaaagaaatagaa
ttacaagaccctctagaaaacatgggagctcaaatggtaaaagaagtagcatcgaaaacc
aatgatttggctggagatggaactacaacggcaaccgttttagcacaagctatcgtaaaa
gaaggcttaaaaaatgtagcagctggagctaacccaatggatttaaaacgaggaatagac
aaagctgtcgaagcaattgttgccgacttgacaaaacaagctaaagttgtgggaagcgat
tcagaaaaaataaaacaaattgcgtctatctctgcaaacaatgatgaagtaattggcgaa
ttaatagcaaacgctttcgcaaaagtaggaaaagaaggagttatcactgttgaagaagcc
aaaggaacagatacttatgtagatgttgtagaaggaatgcaattcgatcgaggatacctt
tcgccatattttgtaaccaatcctgaaaaaatggatgcagaattagaaaacccttacatc
cttctgtatgataaaaaagtttcttctctaaaagaattattacccgttcttgaaccagta
gcacaatcaggaaaaccattattaatcattgccgaagatgtagacggagaagcattatct
acattagtagtaaacaaactacgtggagccttaaaaattgctgctgtaaaagcaccaggt
tttggcgacagaagaaaagcaatgctagaagatattgccatcttaacaggaggaactgtt
atctctgaagaaagaggatttactttagaaaacacaactatcgaaatgttaggaactgca
aaaagagtaactatcgataaagacaacactacaattgtaagtggcgccggagaagctgat
atgattaaaaatcgtgtaaaccaaataaaaggtcaaatggaagcttctacctctgattat
gacaaagaaaaactacaagaacgcttggctaaattagctggaggtgttgctgttctctat
gttggcgcagcttcagaagtagaaatgaaagaaaagaaagaccgtgtagacgatgcatta
cacgcaactcgcgcagctgtcgaagaaggaatagttgcaggtggtggcgtagcgttacta
agagctaaaaacgtcttaaaagacattaaagcagacaatgccgatgaagccacaggaatt
caaatcgtatctcgtgcagtagaagctcccctaagaaccattgtagaaaacgcaggtcta
gaaggctctgtagtagttgcaaaagttgccgaaggttctggtgattttggttacaatgct
aaaactgatgaatatgtagatatgctaaaagctggaattatagaccctaaaaaagtaacc
cgtgtagccttagaaaacgctgcttcagttgcaggaatgatccttactaccgaatgcgct
ttagtagaaataaaagaagaaaatgctggtggcggacaaatgggtggcggtatgccaggc
atgatgtaa
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