Flavobacterium psychrophilum JIP02/86: FP2357
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Entry
FP2357 CDS
T00548
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
fps
Flavobacterium psychrophilum JIP02/86
Brite
KEGG Orthology (KO) [BR:
fps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fps03016
]
FP2357 (truB)
Enzymes [BR:
fps01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FP2357 (truB)
Transfer RNA biogenesis [BR:
fps03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FP2357 (truB)
Prokaryotic type
FP2357 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
CAL44412
UniProt:
A6H238
LinkDB
All DBs
Position
complement(2709851..2710555)
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AA seq
234 aa
AA seq
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MTPEDYLNGQVLLIDKPLKWSSFQAVNKLKYSLINKLGLPKKFKIGHAGTLDPLATGLLI
VCTGKLTKSISEIQGQAKEYTGTFYIGATTPSYDLETQIDATFPIAHITEALIHETVKQF
LGEIDQKPPVFSAIKKDGVRLYEHARAGVEVEIASRKTQIYEFEITRIALPEIDFRVVCS
KGTYIRSLAYDFGLALQSGAHLTVLRRTKIGNYDVKKAIDVTLFDELIVAKNEL
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgactccagaagattatctaaacggtcaagttttactcatagacaaaccattaaaatgg
agttcttttcaagcagtaaataaattaaaatattcgcttataaataaattaggattacca
aagaagttcaaaattggccatgcaggaacactcgatccattagccacaggtttgttaatt
gtttgtacaggaaagcttacaaaaagcatttccgaaatacaaggtcaggccaaagaatat
acaggtactttctacattggcgccactacaccatcgtatgatttagaaacccaaatagac
gccactttcccaatagcacatattaccgaagccttaattcacgaaacagtgaaacaattt
ttaggcgaaatagatcaaaaaccacccgttttttcggctataaaaaaagacggcgtgcga
ttatacgaacacgctcgtgctggtgttgaagtagaaatcgcttctagaaaaacacaaatt
tacgaattcgaaattactcgaatcgctttgccagaaatcgattttagagtcgtttgtagt
aaaggaacttatattcgttcgttagcttatgattttggattggctttgcaatctggcgca
catcttactgttttgcgaagaacaaaaattggcaattatgatgtaaaaaaggctattgat
gttactttgtttgatgaattgattgttgcaaaaaatgaattataa
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