Flavobacterium psychrophilum Z2: AMR72_03330
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Entry
AMR72_03330 CDS
T04556
Name
(GenBank) l,D-transpeptidase YcbB
KO
K21470
L,D-transpeptidase YcbB
Organism
fpsz
Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
fpsz01002
]
AMR72_03330
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
AMR72_03330
Peptidases and inhibitors [BR:
fpsz01002
]
Cysteine peptidases
Family C82
AMR72_03330
Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
AMR72_03330
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
ALM48004
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Position
794350..795927
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AA seq
525 aa
AA seq
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MKRINLVLAIVLGCLLTTVSCKKKDGEVNANTEVHDHDDASIPLDTTQIASFFTKHAEFK
EFEKDVRKLYSKHNHFIWHDRGGLIEFADVLHNRVNQMDNEGLELKIPYKEQLNDIFDSP
KSKPDTESELLISSLYFYYTKNVLEGLDKSKSQQTGWYLPRERVDYVAYLDTLMQDPKLI
KQDKSEMFSQYYNLRKGLQKYREIEKKGAWGTIALGEGVKSLKEGDSAAAVVQIRKRLAL
EGYLKSDSGKSVYDSELAEGLKAYEQKHNREFDGKIGPAMVKELNMSIGDLIKAITVNME
RCRWISPKMDQAPEVIAVNIPSYRLVYYKKGKPAFTSKVVVGKELNKTVVFSGQMSYLNF
APYWNIPTSILNKEIKPGIAKDPNYLSKHNMEWVDGKRVRQKPGGQNSLGKVKFMFPNSN
NIYLHDTPAKSLFNKDDRAFSHGCVRVEKARDLAIMITKEDGNWTEAKVDKAMNAGKEST
YSLKKKIPVYIAYFTAWADENGNVSFYEDIYKRDERLAGLLYAAK
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataaatttagtattagccatagtgttgggatgcctgctaacaacggtttcc
tgcaagaagaaagacggagaggttaatgccaataccgaagtgcacgaccatgatgatgca
agtatacctttggacactacgcagatcgcttcattctttactaaacatgcagagtttaaa
gagtttgaaaaagatgtaagaaaattgtattctaagcacaaccattttatatggcacgat
agaggtgggcttattgagtttgccgatgtattgcataacagggtaaaccagatggataat
gaagggcttgaattaaagattccgtacaaagaacaactgaacgacatttttgatagccct
aaaagtaagccggataccgaaagtgaattgcttataagctcattatacttttattacacc
aaaaatgtacttgaaggccttgataaaagtaaaagccagcaaacaggatggtatctgcca
cgtgaaagggttgactatgtagcgtatctggacacgttaatgcaggaccctaagcttatt
aagcaggacaaatctgaaatgttcagtcaatactataaccttcgcaaaggattacagaaa
taccgcgaaattgagaaaaaaggcgcatggggaactattgcccttggtgaaggtgtaaaa
tcacttaaagaaggtgattctgctgcggctgtggttcagatacgaaaaagattagctctt
gagggttatcttaaaagtgattctggaaaatcggtttacgatagtgaacttgccgaaggc
ctgaaagcctatgagcagaaacacaaccgtgaatttgacggtaagataggcccggctatg
gtaaaggaacttaatatgtctataggcgaccttattaaagccattactgttaatatggag
cgttgccgatggatatcgcctaaaatggatcaggcaccggaagttatagcagttaacata
ccttcataccgattggtatattataaaaaaggcaaacctgctttcacctctaaagttgtg
gttggtaaagaactgaataagacagttgttttcagcgggcagatgagttaccttaatttt
gcaccgtactggaatataccgaccagtatattaaataaagagattaaaccgggtattgca
aaagaccctaattatctttctaaacataacatggagtgggtagatggcaaacgtgtacgc
cagaaaccgggaggacaaaactctttaggaaaagtaaaattcatgttccctaactcaaac
aacatctatcttcacgatacacccgctaagagtttattcaataaagatgacagggcattt
agtcatggttgcgtacgtgtggaaaaagcacgtgaccttgccatcatgattacaaaagaa
gatggcaactggacagaagctaaagttgataaagccatgaatgccggaaaagaaagcact
tacagccttaagaaaaagattcctgtatacattgcttactttacagcatgggccgatgaa
aacggaaatgtttctttctatgaagatatttataaacgtgacgaaaggcttgcaggctta
ttatatgcggctaaatag
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