Flavobacterium psychrophilum Z2: AMR72_06915
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Entry
AMR72_06915 CDS
T04556
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpsz03032
]
AMR72_06915
03400 DNA repair and recombination proteins [BR:
fpsz03400
]
AMR72_06915
Enzymes [BR:
fpsz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AMR72_06915
DNA replication proteins [BR:
fpsz03032
]
Prokaryotic type
DNA Topoisomerases
AMR72_06915
DNA repair and recombination proteins [BR:
fpsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AMR72_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
ALM50714
LinkDB
All DBs
Position
complement(1573488..1575989)
Genome browser
AA seq
833 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGAGYQVESSYGHIADLPSKEIGVDVENGFKPKYEVSPDK
KALVKKLRDLSKSADMVWLASDEDREGEAIAWHLAEELKLDKAKTKRIVFHEITKTAILK
AIDNPRDINYNLVNAQQARRVLDRLVGYELSPVLWKKVKSGLSAGRVQSVSVRLIVERER
EIQNFKAEASYSVTAEFVNEAGKTLKAKLPKNFATKQEAQDFLNKNIGSAYKVSDLETKP
AKKSPAAPFTTSTLQQEAARKLYLPVGVTMMLAQRLYEAGLITYMRTDSVNLSQDAMAAA
EAEIIRSYGKEFSKPRNFANKSKGAQEAHEAIRPTDMSRHTVNIDRDQARLYDLIWKRTL
ASQMSDAELERTNVKIEANNHKELFTASGEVLMFEGFLKVYLEGSDDEDVEQEGMLPALR
VNEKLANNYITATERFSRPPARYTEAALVKKLEELGIGRPSTYAPTISTIISRNYVEKGS
FEGQERKYKQLSLRGASVSEQELSENVGSDKGKLVPTDIGIIVNDFLVNHFETILDYNFT
AKVEQDFDEIASGNEDWTKMMGDFYGHFHPTVQNVEKNAERESGERILGTDPKTGKPVSV
RLGKFGPMAQIGDAEDENKQFASLLQDQNIGTITLEEVLGLFLLPKGLGEYQGEEVEVNN
GRFGPYVRFGKTFISLPKGEDPLDVTFERAQELINEKQQADAPIGTYKNEPIQKGVGRFG
PFIKWNGIFINVSKKYNFDSLSQSDLTELIEDKLQKDIDKVLHNWEDEGIRVEKARWGRS
VILKGKVKIELSKDVDAAALTLDKVKAMIEEKAPAKKTAAKKAPAKKTAAKKK
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatttagtgatcgttgagtcgcctgcaaaggcaaaaaccattgaaaaattt
ctgggggcagggtatcaggtagagtccagttacggacacatagctgatcttccgtctaag
gaaataggggtggatgtagaaaatggctttaagcccaaatatgaagtgtctcccgataaa
aaagcactggtaaaaaaacttagggatctttctaaatcggccgatatggtttggctggcg
agcgatgaagaccgcgagggtgaggcgattgcgtggcacctggcggaagaactgaagctt
gataaagcaaaaaccaaacgtatcgtttttcatgaaattacaaaaacggcaatacttaag
gctatagataacccaagggatattaactataatcttgtaaatgcacagcaggcacgtcgt
gttcttgacaggcttgtgggttacgagctgtctccggtactttggaaaaaagtaaaaagc
ggactttcagccggacgtgtgcagtcggtttctgttcgccttatcgtagagcgcgaacgc
gaaatacaaaactttaaagcggaggcttcttatagcgtaactgccgagtttgtaaacgaa
gcaggaaaaactttaaaagcaaaactgccaaagaattttgcaacaaaacaggaagctcag
gatttcttaaataaaaatatcggttctgcttataaggtttcagatcttgaaactaagccg
gctaaaaaatcacctgcggcaccatttaccacatctacattacaacaggaggctgcaaga
aagctttaccttccggtaggtgtaaccatgatgcttgcacagcgtttgtatgaggccgga
cttattacctacatgagaacggatagtgttaacctttctcaggatgctatggctgcggcc
gaagctgaaattatcaggtcgtacggtaaagaatttagtaagccaagaaattttgctaat
aagagtaaaggagcacaggaagctcacgaggctatccgtcctacagatatgtcgcgccac
acagtgaatatagaccgtgatcaggcaagactatatgacctgatctggaaaagaacgctg
gcatctcaaatgagtgatgccgaactggagcgtaccaatgtaaagatcgaagcaaataat
cataaagagctgttcactgcatcgggtgaagttttaatgtttgaaggtttcctaaaagta
tatcttgaagggagtgatgatgaagatgtagaacaggaaggtatgctgcctgcactacgt
gtaaacgaaaagttagcgaataactatattacggctaccgaacgtttttcaaggccgccg
gcacgctatactgaagctgcactggttaaaaaacttgaagagcttggtatcggtcgtccg
tctacgtatgcaccgaccatttcgactatcatcagcaggaattatgttgagaaaggtagt
tttgaaggtcaggagcgtaagtacaaacaattaagtttaagaggggcttctgtttctgaa
caggaactttcagaaaatgttggttcagataaaggtaagctggtgcctacagatatcgga
attattgtgaatgacttccttgtgaatcattttgaaacaattcttgattataatttcaca
gctaaagtagaacaggatttcgatgagatcgcttcgggtaacgaagactggactaaaatg
atgggtgatttttacgggcatttccatcctacggttcagaatgttgagaaaaatgcagaa
agagaatcgggtgagcgtattttaggaaccgatcctaaaacagggaaacctgtaagtgtt
cgtttgggtaaatttggcccaatggcacaaataggtgatgccgaagacgaaaataaacaa
tttgcaagcttgcttcaggatcagaatatcggaacaattacacttgaagaagtactaggg
ttgttcttgttgcctaagggtcttggtgaatatcagggcgaagaggtagaggttaataat
ggtcgtttcggcccttacgttcgttttggtaaaactttcatttcgcttcctaaaggggaa
gatccgcttgatgtgacttttgaaagagcgcaggagcttattaatgaaaagcaacaggcc
gatgcacctatcggtacgtataaaaacgagcctatccaaaaaggcgttggccgttttggt
cctttcataaaatggaatggtatattcatcaacgttagcaaaaaatacaattttgacagt
ctttcgcagtctgacttaacagagctgattgaagataaacttcaaaaagatattgacaaa
gtgcttcacaattgggaagacgaaggtatccgcgttgaaaaagcacgttggggccgttct
gttatcctgaaaggtaaagtgaaaatagaacttagcaaagatgtagatgcagcagcattg
acccttgataaggttaaagcgatgattgaagaaaaggcgccggctaaaaaaacggcagct
aaaaaagcacctgctaagaaaactgccgctaaaaagaaataa
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