Flavobacterium psychrophilum Z2: AMR72_07020
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Entry
AMR72_07020 CDS
T04556
Name
(GenBank) ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
fpsz
Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpsz03400
]
AMR72_07020
DNA repair and recombination proteins [BR:
fpsz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
AMR72_07020
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
ResIII
AAA_16
TrwB_AAD_bind
AAA
FtsK_SpoIIIE
AAA_10
AAA_30
Zot
SLFN-g3_helicase
P-loop_TraG
AAA_19
CbiA
AAA_7
nSTAND3
T2SSE
TraG-D_C
AAA_6
Zeta_toxin
Hydrolase
AAA_5
AAA_11
SRP54
RF-1
Motif
Other DBs
NCBI-ProteinID:
ALM48664
LinkDB
All DBs
Position
1598805..1600331
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AA seq
508 aa
AA seq
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MADTTHFLETITNGYQAKGATITLGTAMLNGKPVQDAFIKIPLKTLNRHGLIAGATGTGK
TKTLQVLAEQLSENGVPVLMMDIKGDLSGIAKAAQEQPFITERHAKIGLPYEAKAFPVEL
MSLSQQDGVRLRSTVSEFGPVLFSRVLGLNDTQTGVVNVIFKYCDDHNMPLLDLKDIKKV
LQYITDEGKTEIEKEYGRISTSSTGSILRKIIELEQQDADLFFGELSFDINDLMRIDEQG
RGYINIIRLTDIQDKPKLFSTFMLSLLAEIYNTMPEKGDADQPELVIFIDEAHLIFDEAT
KTLLDQIESIVKLIRSKGVGIFFVTQNPTDVPNGVLSQLGLKIQHALRAFTATDRKAIKL
TAENYPISEFYKTDEIITQLGTGEALVTALSEKGNPTPLAATMLRAPMSRMDILTSDEIT
QLNASSRLVKKYSAVTDRESAYEMLCKKIEAAEVQEAEAQQQKAEERSAKTASKSSSTGS
TIEKQIIKTVTSATFIRGVFGVLNKMFK
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atggcagacacaactcactttttagaaaccattacaaacggttaccaggcaaaaggcgct
acaatcaccttaggtaccgcaatgcttaacggcaagccggtacaggacgcttttataaag
attccgcttaaaacccttaatcgtcacggacttattgccggagcaacgggtacaggaaaa
accaaaacacttcaggtgcttgccgaacaactttctgaaaatggtgtgcctgttttaatg
atggacataaaaggtgatctaagtggtattgcgaaagcagcacaggaacaaccctttata
actgaaaggcatgctaagataggcttaccatatgaagccaaagcgtttcctgtagagttg
atgtcgctatcacaacaggatggtgtgaggctaagatctaccgtgtcggaatttggcccg
gtattgttttcaagggtattggggcttaacgacacacagacgggagtggtaaatgtaatt
tttaaatactgcgacgaccacaatatgccattgctggatttaaaagacattaaaaaagta
ctgcaatatatcactgacgaaggcaaaactgaaattgaaaaagaatacggcaggatatct
acatcgtcaacaggttctatacttcgcaagatcattgagctggaacaacaggatgccgat
ctgttttttggagaattgtcttttgacattaacgacctgatgcgtatagatgagcaggga
cggggctacattaatattatacgtttaacagatattcaggacaagccaaagctgttctca
acttttatgctttcgcttttagccgagatatacaatactatgcccgagaaaggcgatgcc
gatcagccggagcttgtaatttttatagatgaggcacaccttatatttgacgaggctacc
aaaacacttttagaccagattgaatctatcgtaaaactgatacgctctaaaggtgtgggc
attttctttgtaacccaaaaccctaccgatgtgcccaacggagtattaagccaattaggg
ttaaaaattcagcatgccctgcgtgcctttaccgcaaccgacagaaaagccattaagctt
accgctgaaaattatcctatttctgaattctacaagacggacgagatcattacacaatta
ggtacaggcgaagctcttgttacagcgctgagtgaaaagggcaatcccacccctctcgca
gctactatgctccgcgcaccaatgagccgaatggacattctgacttctgatgaaatcaca
cagcttaacgcctcttctagactggttaaaaaatacagcgcggtaactgaccgtgaaagt
gcgtatgagatgctctgcaaaaaaattgaagcagccgaagtccaagaagcagaggcacaa
cagcagaaagctgaagagagatcggcaaaaacagcatcaaaatcttcatctaccggaagc
accatagaaaaacagatcatcaaaacagtaaccagtgctacttttataagaggtgtgttt
ggtgtgttgaataaaatgtttaaataa
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