Flavobacterium psychrophilum Z2: AMR72_07030
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Entry
AMR72_07030 CDS
T04556
Name
(GenBank) RNA polymerase subunit sigma
KO
K03086
RNA polymerase primary sigma factor
Organism
fpsz
Flavobacterium psychrophilum Z2
Pathway
fpsz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AMR72_07030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpsz03021
]
AMR72_07030
Transcription machinery [BR:
fpsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AMR72_07030
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r1_2
Sigma70_r4_2
PgaD
DUF6285
Death
Motif
Other DBs
NCBI-ProteinID:
ALM48666
LinkDB
All DBs
Position
1601150..1602013
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AA seq
287 aa
AA seq
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MRQLKITKQVTNRETASLDKYLQEIGKVDLITADEEVELAQRIKAGDQRALEKLTKANLR
FVVSVAKQYQNQGLTLPDLINEGNLGLIKAAQRFDETRGFKFISYAVWWIRQSILQALAE
QSRIVRLPLNKIGSINKINKMYALLEQSNERAPSAEEIAKELDMTVNDVKESMKNSGRHL
SMDAPLVEGEDSNLYDVLRSGESPNPDRELIHESLRTEIERALETLTPREADVVRLYFGL
GDQHPMTLEEIGETFDLTRERVRQIKEKAIRRLKHTSRSKILKTYLG
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaattaaaaattaccaagcaggtaaccaacagggaaactgcttcattagacaag
taccttcaggagattggaaaagtggatttgatcacagcggatgaggaggtagagttagca
caacgaataaaagccggagaccagagagcactagagaaattgacaaaagccaatttacgt
ttcgtggtatcggtagcaaaacaatatcaaaaccagggattaacacttcccgatcttatc
aacgaaggaaacttaggtcttattaaagctgcacagcgtttcgatgaaacacgtggtttt
aaatttatttcatacgcagtgtggtggatccgtcagtctatacttcaagcacttgcagaa
cagtcgcgtattgttcgtttaccgcttaacaagattggatctatcaataagatcaataaa
atgtatgctcttttagagcagagcaatgagcgtgctccttcggcagaagaaatcgctaaa
gaacttgacatgactgtaaacgatgttaaggagagtatgaaaaactcaggccgccacctt
tcaatggatgcgccgcttgtagaaggtgaagactctaacctttatgacgtattacgttct
ggtgagtctccaaaccctgaccgtgagcttattcatgagtcgcttcgtacagaaattgag
cgtgctcttgaaacattaacgccccgtgaggcagatgttgtcaggctttattttggttta
ggtgatcagcacccaatgactcttgaagaaattggagaaacttttgaccttacacgtgag
cgtgttagacagattaaagaaaaggctatcaggagattaaaacacacatctcgcagcaag
atccttaaaacttacttaggataa
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