Flavobacterium psychrophilum Z2: AMR72_11610
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Entry
AMR72_11610 CDS
T04556
Name
(GenBank) alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Pathway
fpsz00300
Lysine biosynthesis
fpsz00470
D-Amino acid metabolism
fpsz00550
Peptidoglycan biosynthesis
fpsz01100
Metabolic pathways
fpsz01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
AMR72_11610
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AMR72_11610
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AMR72_11610
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
AMR72_11610
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
AMR72_11610
Enzymes [BR:
fpsz01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
AMR72_11610
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
AMR72_11610
Peptidoglycan biosynthesis and degradation proteins [BR:
fpsz01011
]
Precursor biosynthesis
Amino acid ligase
AMR72_11610
Racemase
AMR72_11610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Mur_ligase
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
ALM50769
LinkDB
All DBs
Position
complement(2662688..2665117)
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AA seq
809 aa
AA seq
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MQDIIPALHSRFDGIRPDGLIDNVSIDSRSLQNNSGTLFFALSGQNRDGHQYINELINKG
VLNFVVTHIPVDTRGKANFYVVENTLDALQDFAIYYRQLFSFPVIAVTGSNGKTIVKEWL
NYLLSPDYTIIRSPRSYNSQVGVALSVIGINQKHNLGIFEAGISLPGEMEKLEPIIRPDI
GVLTNIGTAHDEGFSSREEKIKEKLKLFSRIKTLIYRKDDAVSTLLNPNIKTFTWDYSEG
ADVTIGKSQSLGKTTLTVNHNATSFEAEIPFTDDASVENAVNSMMVLLNLDYSHEVIKER
LAGLYPVELRLQVKNGINGCTLIDDSFSADYQSLKIALDFLEQHKTHKKKTVILSDVFQS
GFETEELYAKVAKLLSGHNISQVIGIGETISRELADFPNFFPYNTTQEFLTHYKAGSFEN
ETVLIKGARSFRFDEIVVFLEEKTHETVLEINLNAIVHNLNFYKSRLKPETKIMVMVKAF
GYGSGSYEIAKALSHQKVDYLGVAFADEGIALRNAGITTPIIVMNPERSAFAAMAAYNLE
PEIYSAKELRTFIAVAQQKNLSNYPIHIKLDTGMHRLGFMENQLDELIDLLRNNNLVSVK
SIFSHLSSSDVPEYRDFTLGQINNFERWSAKLISELEIDPIRHILNTSGIYNFPEAQYNM
VRLGIGLYGVGNDKTESKQLETVGTLKTVILQIKDIEPGESIGYSRRFIATENIRIATLP
IGYADGIPRAWGNQKGYVSINGKKAQITGTISMDMMMVNVTGIDCKEGDRAVIFGKSPSV
VEIAEVLGTIPYEILTSISQRVKRVFYKE
NT seq
2430 nt
NT seq
+upstream
nt +downstream
nt
atccaggatataatccccgcgctgcattcccggtttgatgggatacggcccgacggtctg
attgataatgtttcaatcgacagccgttcgctgcaaaacaacagcggcactttgtttttt
gcccttagcggacaaaaccgcgacggtcatcaatatataaatgaacttataaataagggt
gtactcaattttgtggtgacacacatacctgtggatactagaggcaaagccaacttttat
gttgttgagaatacgctcgatgcccttcaggattttgcgatatactacaggcaattgttc
agctttcctgttattgccgttaccggaagcaacgggaagacgattgtaaaagaatggctg
aactatttgctaagtccggattacactatcatcaggagtccgcgcagctataactctcag
gtaggcgttgcgctttctgtcattggcattaaccaaaaacataacctgggtatttttgaa
gccggtatttccttacccggcgaaatggaaaaactggaaccgatcatccgtccagatatt
ggagtgttgacgaacattggtaccgcacacgacgaaggcttcagcagccgtgaagagaag
atcaaagaaaaattaaagttgttcagcagaataaaaacgctcatctatcgaaaagacgat
gcagtttctacattgctaaacccaaacataaaaacttttacctgggattattctgaaggt
gcagatgtgaccatcggcaaaagccagagtttaggaaagacaacactcactgttaatcac
aatgctaccagctttgaagctgagattccgtttacagatgatgcttcggtagaaaatgcc
gttaatagcatgatggtattactaaaccttgactacagccatgaagtaatcaaagaacgc
cttgccggtctataccctgtagagcttcgccttcaggtaaagaatgggatcaacggctgc
actcttatagatgacagtttcagtgccgactatcagtcccttaaaattgcgctcgacttt
ttagagcagcataaaacgcacaaaaaaaagacggttatactatctgatgtttttcaaagc
ggatttgaaaccgaagagctttacgccaaagttgccaaactgctttcgggacacaatatt
agccaggttataggtattggagaaaccataagccgtgaactcgccgactttcccaatttc
tttccatataacacaacacaggagtttcttacgcattataaagcgggttcgtttgaaaat
gaaacggtactgataaaaggcgcacgaagtttccgttttgatgagatagtagtgtttctt
gaagaaaagacacacgagacggttttagagataaacctgaacgcgattgtacataacctg
aacttttataaaagccgcctgaaacccgaaaccaagattatggtaatggttaaggcattt
ggatacggcagtggcagctatgaaattgcaaaagccctttcgcaccaaaaggtagattat
ttgggtgtggcattcgccgatgaaggcattgcccttcgtaatgcaggcataactactccg
attattgtaatgaatccggaacgtagtgcgtttgccgcaatggctgcgtataatttagaa
cccgagatctattcggcaaaagaattacggacgtttattgcagtggcacaacaaaagaat
ctttctaactaccctatccatattaaactcgacacgggtatgcaccggttagggtttatg
gaaaatcaactggatgaactgatcgacctgctgcgtaacaataacctggtatcggtaaag
agtattttttcgcacttatcgtccagcgatgttcccgagtatcgtgattttactttagga
cagatcaataacttcgaacgctggtcggcgaaactgataagcgaactggaaattgaccct
atccgtcatatattaaatacgtcgggcatttacaatttccccgaagcacaatacaatatg
gtacgcctgggtatagggttgtacggcgtaggcaatgacaaaaccgaaagcaaacaactg
gaaacagtaggcacgcttaaaaccgttatccttcagataaaagacattgaacccggagaa
agcatcggctatagccgcagatttatcgctaccgaaaatattcgcattgctacgctgcct
attggttatgccgatggtattccaagggcgtggggtaaccagaaaggctatgtaagcatt
aacggtaaaaaggcacaaattaccggaaccatatctatggatatgatgatggtaaacgtt
accggcatagattgtaaggaaggcgacagggcagtgatatttggcaaaagcccttctgtt
gttgagatagcggaggtgctgggcacaattccgtacgagattttaacgagcatttcacaa
cgggttaagagagttttctacaaagaatag
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