Flavobacterium psychrophilum Z2: AMR72_13715
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Entry
AMR72_13715 CDS
T04556
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Pathway
fpsz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AMR72_13715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpsz03021
]
AMR72_13715
03400 DNA repair and recombination proteins [BR:
fpsz03400
]
AMR72_13715
Enzymes [BR:
fpsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AMR72_13715
Transcription machinery [BR:
fpsz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AMR72_13715
DNA repair and recombination proteins [BR:
fpsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AMR72_13715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Fungal_KA1
Motif
Other DBs
NCBI-ProteinID:
ALM49869
LinkDB
All DBs
Position
3120177..3121169
Genome browser
AA seq
330 aa
AA seq
DB search
MAIFNFQKPDKVIMIDSTDFQGKFEFRPLEPGYGLTVGNALRRVLLSSLEGYAITSVRIE
GVDHEFSTIAGVVEDVTEIILNLKQVRFKRQIEDIDNESVSVSFTGKDQLTAGDFQKFIS
GFQVLNPDFVIFNMDSKININLELTIEKGRGYVPAEENKKQNAAIGTIFTDSIFTPVKNV
KYAIENFRVEQKTDYEKLVFEIITDGSIHPKEALTEAAKTLIHHFMLFSDERITLEADEI
AQTESYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSFNKNDLMKFRNFG
KKSLTELDELVASKNLHFGMDLTKYKLDKE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatatttaattttcaaaagcccgataaagttatcatgatcgattctaccgatttc
caaggtaaatttgaatttagacctttggaaccgggatatggactgacagttggtaacgca
cttagaagagttttactttcttcattagaaggttatgcaattacttcagttcgaattgaa
ggagttgaccatgagttctctacaatcgcaggggtagttgaagatgttactgaaataatc
ctgaacttaaaacaagttcgtttcaaacgtcagatagaagacattgataatgaatcggtt
tctgtatcttttacaggtaaagatcagcttacagctggtgatttccaaaagttcatttca
ggattccaggtgttaaaccctgactttgttatctttaacatggacagcaaaataaacata
aaccttgaacttactatcgagaaaggtagaggttatgtgcctgcagaagagaacaaaaag
caaaacgcagcaataggaactatttttacagattcaatctttactccggtaaagaatgta
aaatacgcaatagaaaacttccgtgttgaacaaaaaacagactacgaaaaactggttttt
gaaatcatcactgacggatctattcatcctaaagaagcgcttactgaggcagcaaaaaca
ctgattcaccactttatgctgttctctgatgaaagaataacacttgaggccgatgaaatt
gcacaaacagaatcatatgatgaagaatcattacatatgagacaattgcttaaaactaag
cttgttgatatggatctttctgtaagggcattaaattgtttaaaagcggctgaagttgat
acattaggagacttagtatcgttcaacaaaaatgacttaatgaaattccgtaattttggt
aagaaatcgttaacagagcttgacgaacttgttgcttctaaaaatttacacttcggaatg
gacttgacgaaatacaaattagataaagaataa
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