Flavobacterium psychrophilum Z2: AMR72_15100
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Entry
AMR72_15100 CDS
T04556
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Pathway
fpsz03030
DNA replication
fpsz03430
Mismatch repair
fpsz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AMR72_15100
03430 Mismatch repair
AMR72_15100
03440 Homologous recombination
AMR72_15100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpsz03032
]
AMR72_15100
03400 DNA repair and recombination proteins [BR:
fpsz03400
]
AMR72_15100
Enzymes [BR:
fpsz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AMR72_15100
DNA replication proteins [BR:
fpsz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AMR72_15100
DNA repair and recombination proteins [BR:
fpsz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AMR72_15100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
DUF7508
Motif
Other DBs
NCBI-ProteinID:
ALM50107
LinkDB
All DBs
Position
3416286..3417680
Genome browser
AA seq
464 aa
AA seq
DB search
MMKKEYAIVDIETTGGNAGGSRITEIAIIIHDGISIVDRWETLVNPQKEIPIPIFALTGI
NNEMVRDAPIFDDIAQKVFEMLTDRVFVAHNVNFDYSFVRHQLEESGFKWTARKLCTVRA
SRKIKPGLGSYSLGNLCRSLEIPVEYRHRAGGDADATVILFSRLLEWDSEGEIDKMVKKT
AQDQRLPPNLPPEDFEQLPEKPGVYYFYNQAKKVVYVGKAVNLKKRVASHFSGHKITPQR
QHFLRDIHAISFEVCATELMAFLLECTEIKKLWPIHNKALKRFETKYGLYEYEARSGYRY
LAVGKVNKFQACIQVFNNLQGGINLLRNLAEQFDIDYRFCKYCTESEKEVFQQPDLSHLP
NVIDHNEQIENAIDFVLQNRPSFGIIDKGRSKDERSCIWVENGHFYGMGYITTDVAITEP
SEIKEYVTPYKSNNYIMQLIYTYAQKYPGRVIVKNKTSTDYIPI
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaaggagtatgctatagtagatattgagaccacaggcggtaatgcaggtggt
agccggattacagagattgcaattattattcatgacggtataagtattgtagaccgttgg
gaaacactcgtaaacccgcaaaaggaaatccctattcccatttttgcgttgacgggtatc
aataatgaaatggtgcgtgatgctcccatattcgacgatatcgcgcagaaagttttcgag
atgcttaccgaccgtgtttttgtggcccacaacgtaaattttgattactcgtttgtacgc
catcagctggaagagtccggctttaagtggacggcaagaaagctgtgcacagtgcgcgct
tcaagaaaaataaaaccagggttaggttcctatagcctggggaatctttgcaggtcttta
gagatacctgtagagtacaggcatcgcgcaggcggtgatgcggatgcaaccgtaattctg
ttttcaagattattggaatgggatagcgaaggggaaatcgacaagatggttaagaagaca
gcacaagaccaacgccttccacccaaccttccgccggaagactttgaacaattgcctgaa
aaaccaggtgtatactatttttataaccaggccaaaaaagtagtgtatgtaggtaaggct
gtcaacttgaaaaagcgtgtggcttcgcactttagcggacataaaattacgccgcagcga
caacatttcttacgggatatacatgctatatcttttgaagtctgcgctacagagttaatg
gcatttctgctggagtgtaccgaaattaaaaagctatggcctattcacaataaagcatta
aaacgctttgaaacaaaatacggactctatgagtacgaagctcgaagcgggtacaggtat
cttgcggttggtaaagtcaataaatttcaggcgtgtatacaggtttttaataatttacag
ggcggaattaatttgcttcgcaatcttgcagaacagtttgacatagattataggttttgc
aagtactgtacggaaagtgaaaaagaagtctttcaacaaccggatctttcccatttacct
aatgttatagatcataacgagcaaatagaaaatgctattgatttcgttttacagaacagg
ccaagctttggtattatagacaaaggcaggtctaaagatgagcgcagttgtatttgggta
gaaaacggtcacttttatgggatgggatatatcactaccgatgttgccattactgaacca
tctgagataaaagagtatgttacaccttacaaaagcaataattatattatgcagttaatt
tatacctacgcgcaaaaatatcccggtagggtgattgtgaaaaataaaacttctaccgat
tatataccgatatga
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