Flavobacterium psychrophilum Z2: AMR72_17915
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Entry
AMR72_17915 CDS
T04556
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
fpsz
Flavobacterium psychrophilum Z2
Brite
KEGG Orthology (KO) [BR:
fpsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
fpsz03016
]
AMR72_17915
Enzymes [BR:
fpsz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AMR72_17915
Transfer RNA biogenesis [BR:
fpsz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AMR72_17915
Prokaryotic type
AMR72_17915
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
ALM50591
LinkDB
All DBs
Position
complement(4075010..4075744)
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AA seq
244 aa
AA seq
DB search
MRYFIEFAYNGKNYCGWQYQPHSPSVQETLNKALSTLLRTTVDVVGAGRTDTGVHARQMF
AHFDHEEITDTTKLVQKLNSFLPQDIVVYRFIPLHEDAHARFDAKSRTYEYHIHTYKDAF
DFEGSWYHFHPLNVEKMNEAAKLLLNYTDFKCFSKTHTDVRTFNCDVREACWDMQDNKLV
FTVTADRFLRNMVRAIVGTLISVGLEKISIDDFKAIIESRDRNKAGFSVPAHGLYLTKVI
YPYL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgagatactttatcgagtttgcatacaatggaaaaaattattgcggatggcaataccag
ccgcatagcccatcggtacaggaaactttaaacaaagctttgtctactctgcttaggaca
actgtagatgttgtaggtgccggccgtaccgataccggtgtacatgcacgacagatgttt
gcccattttgaccacgaagaaattacagatacaaccaagcttgtacaaaagctgaattca
tttttaccacaagatattgtagtgtatcgttttataccgctgcacgaggatgcccatgcc
cgttttgatgcaaaaagcagaacgtacgaatatcatattcatacctataaggacgctttt
gattttgagggaagctggtaccactttcatccgctgaatgttgaaaagatgaatgaagct
gctaaactccttttaaactataccgactttaaatgtttctctaaaacacataccgatgtc
aggacgtttaattgtgatgtcagggaggcgtgttgggatatgcaggataacaagctggta
tttactgtaaccgccgaccgttttttacgcaacatggtaagagcaattgttggaacactt
attagcgtaggcctcgaaaaaataagcattgatgactttaaagccatcattgaaagccgc
gacagaaacaaagcaggattttcggttcctgcacacggattataccttaccaaggtaatt
tatccgtacctttaa
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