Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L: BZ13_1803
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Entry
BZ13_1803 CDS
T03764
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
fpt
Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L
Pathway
fpt03410
Base excision repair
fpt03430
Mismatch repair
fpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
fpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BZ13_1803 (recJ)
03430 Mismatch repair
BZ13_1803 (recJ)
03440 Homologous recombination
BZ13_1803 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
fpt03400
]
BZ13_1803 (recJ)
DNA repair and recombination proteins [BR:
fpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BZ13_1803 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BZ13_1803 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BZ13_1803 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
DUF7222
Motif
Other DBs
NCBI-ProteinID:
AJI74817
LinkDB
All DBs
Position
complement(1841375..1843117)
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AA seq
580 aa
AA seq
DB search
MLIRQKQTNQDILSTLLSKGYDLFLARIISSRVSNFENIDLILKGSIKDLSSPFLFKDID
KAVDRLFQALQNNEIIGLETDHDCDGQTSHAILYEALTKIFNYPQEKIRSYIGHRMQEGY
GLSESLMNRILTDSIRPNLIITADNGSTDEPRIAVLKQNGIDTIVTDHHGIPPEGAPKSA
IAVLNPTQHDCNYPDKAIAGCMVAWLFMTALRRKYLQNGKSLSKSYGLSNLLDFVAIGTV
ADCVSMANSHNNRIVTKLGIEQLKNNDRLCWDFLDKEKLSSEYISFSIAPLLNSDGRVSD
ALGSVSFLLENDELKIEETFENLTKQNNQRKEIQKKLTYEAITKAHQLDNDNNSLCILLD
DGHSGIHGITASRVKEMFGKPVIIFSETQNDPNLISGSARSVDSINIKTILDTIALKSPT
LMIKYGGHKGAAGLTINKSDFNTFYDLFESEIINFIKNDSISLEPILEYDFELDENDFKL
QILEKIESLEPFGREFEKPLFYNSFTIENLRLVGKDKNHAQLILRYKNIPSIKAIWFNAL
ENKIIEQIAIGDTIKACYELQKEEFLGQTNLSLNIKLIEK
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgttaataagacaaaaacaaactaatcaagatatattatctacgctattatcaaaaggt
tatgacttatttttagcacggattatctcttctagagtaagtaattttgagaatattgat
cttatactaaaaggctctataaaagatctatcgtccccctttctcttcaaagatatcgat
aaagccgtagatagactttttcaagcgttacaaaataatgaaatcattggattagaaacc
gaccacgactgtgatgggcaaacatctcatgcaattttatatgaagcactgacaaagata
tttaattaccctcaagaaaagattcgttcatatataggtcacagaatgcaggaaggatat
ggtctgtctgaatctttgatgaatagaatattaacagatagtattagaccaaatcttatt
ataacggctgacaatggttcaacagatgagcctaggattgctgttcttaaacaaaatgga
attgatactatcgtaaccgatcaccatggtattcctcctgagggagcgcctaaaagtgct
atcgccgtactaaaccctactcaacatgattgtaattatccagacaaagctatagctggt
tgtatggttgcttggctttttatgacagctcttcgtagaaaatatctgcaaaatggtaaa
tcattatctaagtcttatggattaagtaatttacttgattttgttgcaattggtacagtt
gcggattgtgttagtatggcaaatagtcataataaccgtattgttacaaaactaggtata
gagcaacttaagaataacgatcgtctatgttgggacttcttagataaagagaagctatca
agtgagtatattagtttcagtatagctcccttgctaaatagtgatggaagagtttctgat
gcactaggatctgttagctttttacttgaaaatgatgaacttaaaattgaagaaaccttt
gaaaacctaactaagcaaaataaccaacgtaaagaaattcaaaaaaagcttacttatgag
gcgataactaaagcacatcaattagacaatgataacaactcactatgtatattacttgat
gatggccactctggaattcatggtattacagcaagtagagtcaaagaaatgtttggtaag
cctgtgattattttttctgaaacacaaaatgatcctaacttaatatcaggttctgctagg
agtgtagatagtattaacattaaaacgatacttgatactatagcacttaaatcgcctact
ttgatgataaaatatggtggtcataaaggtgctgctggcttgacaataaacaaatctgat
ttcaatactttttatgatttatttgaaagtgaaattatcaatttcattaaaaatgatagt
atatctttagagcctattttagagtatgattttgaacttgatgaaaatgatttcaaacta
caaattctagaaaagatagaatctcttgaaccatttggtagagaatttgaaaaaccacta
ttttacaacagttttactatagagaatctacgtttagttggtaaagataaaaatcatgcc
caactaattttacgctataaaaatattccttcaatcaaagcgatatggtttaatgcctta
gaaaataaaataattgaacaaatagctattggcgatactataaaagcctgttatgaactt
caaaaagaagaattcctcgggcagacaaacttatctctcaatattaaacttatcgaaaaa
tga
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