Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L: BZ13_206
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Entry
BZ13_206 CDS
T03764
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
fpt
Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L
Pathway
fpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BZ13_206
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpt03019
]
BZ13_206
Enzymes [BR:
fpt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BZ13_206
Messenger RNA biogenesis [BR:
fpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BZ13_206
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
AAA_30
HI1480
AAA_22
MerR-DNA-bind
Flavi_DEAD
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJI75541
LinkDB
All DBs
Position
202086..203423
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AA seq
445 aa
AA seq
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MQFSDLGLNPLICSALEKKGYTKPTPIQAKAIPLVLKGNDVMASAQTGTGKTAGFTLPII
QRLLDQPKAQANRIKTLILTPTRELAAQIQEQIQIYAANTHIRSAVVFGGVSINPQMMKL
RKGVEILIATPGRLLDLYSQNALKFDSLNTFVLDEADRMLDMGFINDLKRIHKLLPKKLQ
TLMFSATFSPEITSLANEFLDNPQSVSADVVNTTVKKITQKIYTLDKSTKINALISLIKD
QDLHQVLVFSRTKHGANKISEKLNNAGITSSAIHGNKSQTARTKALADFKSKDINVLVAT
DIAARGIDIAQLPCVINLDLPNVAEDYVHRIGRTGRAGQDGLAISLVSADEVESLSNIEH
LIGHLLPREELEGFEATHNVPITSMSRKTKAKKIDEVKIIATKRANKNNKNTSQKKSSNH
NKDFAKKIKQKIHQNKSVRKPKAQD
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctcagatttaggtttaaatcctttgatatgtagcgctttagaaaaaaaaggc
tatacaaaaccaactccaattcaagccaaagcgattccattagttctaaaaggtaatgat
gtcatggcatctgcccaaacaggaacaggcaagacagcaggcttcacattaccgattatc
caaagacttcttgatcaaccaaaagctcaagcaaatcgaatcaaaactctaatcctaact
ccaacaagagagttggcagcacaaatacaagaacaaattcaaatatatgcagcgaatact
catattcgttcagcagtggtttttggtggtgttagtatcaatcctcaaatgatgaagtta
cgcaaaggagttgagattttgatagctactccaggtagattgcttgatttatatagtcaa
aatgctctcaaatttgatagcttaaatacatttgttttagacgaagcagacagaatgtta
gatatgggttttattaatgatttaaaaagaatccataagcttttaccaaaaaagttacaa
acattaatgttctcagctacattttcaccagaaataacaagtcttgcaaatgagtttctt
gataatcctcaatcagtatcagctgatgttgtaaatacaacagtcaaaaagattactcag
aaaatttatacactagataaatcaactaagattaatgctttgatttcactaataaaagat
caagatctacatcaggttttggttttttcacgtacaaagcatggtgctaataagatatca
gagaaactaaataatgctggtataacaagtagtgcaatacatggtaataaaagccaaaca
gctagaacaaaggcattagcagatttcaaatccaaagatataaatgtcttagttgcaact
gatatcgcagcacgaggaattgatatcgcgcaactgccatgtgtgatcaatcttgatcta
ccaaatgtagctgaagattatgtccatagaataggtagaactggtagagcagggcaagat
ggtctagctatttctttagtaagcgcagatgaagttgaatcactatcaaatatagaacat
ttaattgggcatttattaccacgagaagagttagaaggttttgaggctactcataatgtg
cctattacaagtatgtcgcgcaaaactaaggctaaaaaaattgatgaagttaaaataata
gctacaaagagagcaaataaaaataataaaaacactagtcaaaagaaaagctcaaatcat
aataaagattttgcaaaaaaaataaaacaaaaaattcatcagaataaaagtgtcagaaag
ccaaaggctcaagattaa
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