Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L: BZ13_290
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Entry
BZ13_290 CDS
T03764
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
fpt
Francisella philomiragia subsp. philomiragia ATCC 25015 O#319L
Brite
KEGG Orthology (KO) [BR:
fpt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BZ13_290 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpt03021
]
BZ13_290 (rpoD)
Transcription machinery [BR:
fpt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BZ13_290 (rpoD)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_ner
Sigma70_r1_1
Sigma70_r1_2
PspA_IM30
Arc_C
Motif
Other DBs
NCBI-ProteinID:
AJI75412
LinkDB
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Position
complement(286477..288213)
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AA seq
578 aa
AA seq
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MTREDLLSDLKDLMVDGKERGYLTRADILDALPGDVSEDPKKYEEIEAILIDAGIDVYDR
TPELDEDDDERKVSEANLDDLKGKTSDPIRMYMREMGIVDLLDKKGETDIAIRIEEGTTE
VFSTILSYPIVVKTYIERFRELEEKAVDYMASQDIEDEPVAKYIRFNEIMAGFSDEQVTE
EKVAEDDHDEKIDTQRAYEFFVNLEKMFEEYQEKPNKKLYSKIVKEFECLRLSTSHLQKL
VDYIRLPYARVKEFERKILRLCVERSKTPRQEFIKVYEIGSIEWLPSLTKKYKFTDNTVK
EIHNLTKQINQFQNLMMMKIEELKKVNVEISKSEAKITQAKKEMIEANLRLVVSEAKKYT
NRGLHFLDIIQEGNIGLMKAVDKFDYRKGFKFSTYATWWIRQAITRSIADQARTIRVPVH
MIETINKVNRIKRQILQEKGREATEEEIIEYTPNMTKDKLKKILNISHTPISMESPIGDD
EDSTVGDFIEDKNNYSPIEAANLENLREAIKELIDTGLTEREAKVLMMRFGIGMNTDHTL
EEVGKQFNVTRERIRQIEAKALRKLKHPSRSAFLKTFL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgacaagagaagatttactttctgatctgaaagatcttatggttgatggtaaagaaaga
ggctatttgaccagagcagatattttagatgcgttgccaggagatgtatcagaagatcca
aaaaaatatgaggaaattgaagctatccttatagatgcaggtattgatgtatatgataga
actcctgaattagacgaagatgatgatgaaagaaaagtaagtgaagctaacttagatgat
ttaaagggtaaaacatctgatcccattcgtatgtatatgcgtgaaatgggaatagtcgac
cttttagataaaaaaggcgagactgatattgctattagaattgaagaaggcactactgag
gtttttagcactattttgagttatccaatagttgttaagacttatattgaacgttttcgt
gagttagaagagaaggctgttgactatatggcttctcaagatatcgaagatgagcctgtt
gctaagtatatccgctttaatgaaattatggctggatttagcgatgagcaagtaactgaa
gaaaaagttgcagaagatgatcatgatgaaaagattgatactcaaagagcatatgagttt
tttgtaaatcttgagaaaatgtttgaagaatatcaagaaaagccaaataagaaactttat
agtaaaatagttaaagaatttgagtgtttgaggttatctacatctcacttacagaaatta
gttgactatattaggcttccttatgcaagggttaaggagtttgagcgaaaaattcttaga
ttatgtgtggaaaggtcaaagactcctcgccaagagtttataaaagtgtatgaaataggc
tctattgagtggctaccatctttgactaaaaaatataaatttacagataatactgtcaaa
gaaattcataacttgacaaagcaaattaatcaatttcagaatttgatgatgatgaaaatt
gaagagcttaagaaagttaatgttgaaatttctaagagtgaagcaaaaattactcaagct
aaaaaggaaatgattgaagcaaatttgagactagttgtttctgaggctaaaaaatatact
aatagaggattacatttcttagatattatccaagaaggtaatatcggattgatgaaagcc
gtagataaatttgattatcgtaaaggttttaagttttcaacttacgcaacttggtggatt
cgtcaggctattactcgatcaatcgcggatcaagcaagaacgattcgtgtaccagtacat
atgatagaaactataaataaggttaatagaattaaacgtcaaattcttcaagaaaaaggt
cgtgaggctacggaagaagagattattgagtatactcctaatatgactaaggataagctt
aagaaaattcttaatatatctcatactccaatttctatggaaagcccaattggtgatgat
gaagattctacagttggtgattttattgaggataaaaataattattctccgatagaggct
gcaaatttagaaaatctaagagaagcaattaaggagcttattgatactggtttaactgag
agagaagcaaaggtactgatgatgcgctttggtattggtatgaacacagatcatacttta
gaagaagttggtaagcagtttaatgttactagggaacgtattagacagattgaagcaaaa
gctcttagaaagcttaagcatccatctagatcagcatttttgaagacatttttataa
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