Fusarium pseudograminearum: FPSE_00006
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Entry
FPSE_00006 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_00006
03036 Chromosome and associated proteins [BR:
fpu03036
]
FPSE_00006
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
FPSE_00006
Chromosome and associated proteins [BR:
fpu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FPSE_00006
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
FPSE_00006
microRNA pathway
RISC loading complex
FPSE_00006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL2
ArgoL1
ArgoMid
Motif
Other DBs
NCBI-GeneID:
20358626
NCBI-ProteinID:
XP_009251401
UniProt:
K3V370
LinkDB
All DBs
Position
1:complement(<1050047..>1053053)
Genome browser
AA seq
984 aa
AA seq
DB search
MSDRGRSPSPGGPSGPGRRPSQSPARSATGSGSGPAGGYAKPLGYDPAKPPKQEDQGNTR
MELPPDAYISETKKDMFTLRNGRFNTEGKPEHIEVNQYRMTKFDFNKKIYQYDVVLSPSP
DKIGPVMKKIWAHPVTVKTMKPYKLEMWLFDGKKLAWSPALVDRGELRFSVDLDEGQRPP
GAKPRDGGKFLVTIRKTTEIQVAALQGYLSHKMSFNNSVQEALNFIDHLVRQFPSKNLLA
IKRNFYQTGRPGAPLQDGAIVEVHKGTYASIRMSDNLKQGGVGLGYNIDVANTCFWIGNQ
PLDRMACNFLATIDPNKFRGHTPATLNEILKPVRNRSGGWESSDGFKQLRKLRRLKFKIK
HKGRPNEDKLYTIMDFAFDAKFGEAGHTSRTHTFEKDGKDISVYDYYKKMYNVTLRLSHL
PLINAGKGGFIPMELAFVESMQRYPFKLNPEQTSAMIKIAVTRPNVRKADIQKGAAALQI
GQDPYLREYGVNFEAQFAKTEARILPPPTVRFGQGTAEPKFAGRWDLRGKKFFKQNTAPL
QNWGFVACEAPVPQAVLSAFATTFKTTFLGHGGKVIGDPMLLNAPAGLRFEPGKLVEWAH
EEITRRKGYTQLLFIVVSKKNSGTYERLKKSADCRYGILSQVVLGSHVQKNNGQYHSNVC
MKVNAKLGGATACTPPLWKTPTFFPDSRPTIIVGCDVSHAAPGGATASVASMTMSVDPNA
TRYAAVAQTNGYRVEMLTPSNIRLMFAELLPQWRHNHPGKIPAHLIYMRDGVSEGQFAHV
LEQEVSEIKKFFGSSLPPDKIPKMTVIIATKRHHVRFFPQKGDKNGNPLPGTLVEKEVTH
PFMFDFYLNSHVAIQGTARPVHYSVILDEMAMPVNDLQKMIYQQCYSYARSTTPVSLHPA
VYYAHLASNRARAHENVATSDGFRTGAKGHEIIREKQAHGITSTAPNRTADAPPLIRLGG
PCGQTPADGEKRQRDFFRSTMWYI
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagaggccgttcaccctctccggggggtccctcagggcctggaagacgacct
tcccagtccccagcccgatctgcgactggctctggtagtggacctgctggcggctatgca
aagcccctgggctacgatcctgcgaagcctccaaagcaggaggaccagggaaacacacga
atggaactacctccagatgcgtacatctccgagaccaagaaggatatgttcactctgcga
aacggtcgtttcaacactgagggaaagcctgagcacatcgaggtcaaccagtaccgaatg
accaagttcgacttcaacaagaagatctaccagtacgatgttgtactttcgcctagccct
gacaagatcggaccggtcatgaagaagatttgggcccatcctgttaccgtgaagaccatg
aagccttacaagcttgagatgtggcttttcgacggtaagaaactggcatggagccccgcg
cttgtcgaccgcggtgaacttcggttcagtgtcgatctagacgaaggccaacgtcctcct
ggagccaagcctcgggatggtggcaagttcctggtcactattcgaaagaccaccgagatc
caagttgctgctctgcagggctatctgtctcacaagatgtcgttcaacaacagtgttcag
gaggcactgaacttcattgatcaccttgttcgacagttcccctccaagaacctacttgct
atcaagcgaaacttttaccaaactggtcgacctggagctcctcttcaagacggggccatc
gttgaagtccacaagggaacctacgcttcaatccgaatgagtgacaacttgaagcaaggt
ggtgtcggacttggctacaacattgatgtcgccaacacctgtttctggattggcaaccag
ccattggacaggatggcctgcaactttcttgctaccattgacccaaacaagttccgagga
cacactcctgcgactctcaatgagatcctcaagccggtcaggaacaggagtggcgggtgg
gagtcatctgatggcttcaagcagcttcgcaagttgcgacgcctcaaattcaagatcaag
cacaagggccgcccaaacgaagacaagctgtacacgatcatggactttgcattcgatgcc
aagtttggtgaagctggtcacacttctcgcactcacacctttgagaaggatggaaaggac
atcagcgtctatgactactacaagaagatgtacaatgtcactctgcgactttcccacctt
cctcttatcaacgctggaaagggtggcttcattcccatggagcttgccttcgttgagagc
atgcagcgataccctttcaagctcaacccagaacagacatctgcgatgatcaagatcgct
gttacccgccctaacgtccgcaaagccgacatccaaaagggagctgccgctcttcagatc
ggccaagatccttatctgagggagtatggtgtcaatttcgaagcccaatttgcgaagacc
gaggctcgtatcttgcctccccctactgtcaggtttggccagggcacagcggaacccaag
ttcgctggtcgctgggacttgagaggaaagaagttcttcaagcagaacaccgcccccctc
cagaactggggctttgttgcctgtgaagcacctgtcccacaggctgttctttcagcattc
gccacaacattcaagaccacttttcttggtcacggcggcaaggtgattggagaccccatg
cttctcaatgcacctgccggcctgcgttttgaacccggaaagctggtcgagtgggctcac
gaggagatcactcgccgaaagggctacacacaactcttgttcatcgtcgtgtccaagaag
aacagtggtacctacgagcgcctcaagaagtctgctgattgcagatacggcattctcagt
caggttgtccttggcagccatgtgcagaagaacaatggccaataccactccaacgtttgc
atgaaggtgaacgccaagcttggtggtgccactgcctgcacgcctcctctgtggaagact
cctacattcttccccgacagccgcccaaccatcattgtaggctgcgatgtctcccacgct
gctcccggtggtgcgactgcttcagttgcttccatgaccatgtctgtggaccccaatgcc
actcgatacgccgcagtcgctcagacaaacggatatcgcgtcgagatgcttacccccagc
aacattcgactcatgtttgcagaactcctccctcagtggcgacacaaccacccaggaaag
atacctgctcatctgatctacatgcgagatggcgttagtgaaggccagttcgctcatgta
ttggagcaggaggtatccgaaatcaagaaattctttggaagcagcctcccccccgacaag
attcccaagatgacggtcattatcgccacgaagcgtcaccatgtacgcttctttccacag
aagggtgacaagaacggaaatcccttgcccggtactctggttgagaaggaagttacccac
cctttcatgtttgacttctacctcaactcccatgttgctatccagggaactgcacgcccc
gtgcactactcggtgattctggatgagatggctatgcccgtgaatgatctgcagaagatg
atttaccagcagtgctattcctacgcccgctcaaccacccccgtctcccttcacccggcg
gtctactacgcgcatctcgctagcaaccgagctcgcgcacacgagaacgtcgcaaccagt
gatggattcagaaccggtgccaaggggcatgagattattcgggagaagcaagcccatggc
atcacctcaaccgctcctaacaggaccgctgatgcaccccccctgatccgtctgggaggt
ccttgtggacagactcctgctgatggcgagaagcgccagcgagatttcttccgcagtacc
atgtggtacatctaa
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