Fusarium pseudograminearum: FPSE_00152
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Entry
FPSE_00152 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_00152
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_00152
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_00152
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPSE_00152
Spliceosome [BR:
fpu03041
]
Complex A
U1 snRNP components
U1 related factors
FPSE_00152
Complex B
FPSE_00152
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
Pre-60S particles
Helicases
FPSE_00152
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Rod_N
Helicase_C_2
Utp25_C
P-loop_SecA
FtsK_SpoIIIE
Glyoxalase_3
Motif
Other DBs
NCBI-GeneID:
20358772
NCBI-ProteinID:
XP_009251547
UniProt:
K3VWS1
LinkDB
All DBs
Position
2:7059750..7062561
Genome browser
AA seq
558 aa
AA seq
DB search
MSGYDGGYSGGGGRGGGGYGGGGYGRDRGGDRGGDRNGGGFGGRSNGNGYGGGGYGGGGG
GGYGGGGFGGGAGGDRMGALGSGLKNQEWDINTMPKFEKSFYKEHPDVETRSDADVEAFR
RKHQMTIAGSNVPKPVETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGI
AETGSGKTLTYCLPSIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQEEMKKFGRSSRIR
NTCVYGGVPKGPQIRDLSRGVEVCIATPGRLIDMLEAGKTNLRRVTYLVLDEADRMLDMG
FEPQIRKIIGQIRPDRQTLMWSATWPKEVRALASDFLQDFIQVNIGSMELAANHRITQVV
EVVTEMEKRDRMIKHMEKVMENKENKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQ
NERDWVLDQFKTGKSPIMVATDVASRGIDVRNITHVLNYDYPNNSEDYIHRIGRTGRAGA
MGTAITLFTTDNQKQARDLVNVLQEAKQQIDPRLVEMTRYGGGGGGRGYGGWGRGRGGGR
DWDDDVVLSGMKTLNGGD
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtctggctacgacggcggatacagcggcggtggtggccgcggaggcggcggctacggt
ggtggtggttacggccgcgatcgtggtggtgaccgaggcggtgaccgcaacggtggtggt
ttcggaggtcgaagcaacggaaatggctacggaggtggtggctacggcggcggcggtggt
ggtggttacggaggtggcggtttcggaggaggtgctggcggcgaccgtatgggcgctctc
ggctctggcctcaagaaccaagaatgggatatcaacacaatgcccaagttcgagaagtct
ttctacaaggagcaccccgacgttgaaacccgatctgatgccgatgttgaggctttccgc
cgcaagcaccagatgaccattgctggctcgaacgttcccaagcctgtcgagaccttcgac
gaggctggcttcccccgatatgttatggatgaggtcaaggctcagggtttccctgctccc
accgccatccagtctcaaggttggcccatggctctctccggtcgcgatgtcgttggtatt
gccgagactggttccggaaagaccctcacctactgccttccctccatcgttcacatcaac
gcccagcctctcctcgcccccggtgatggccccattgttcttgtcctcgctcctactcgt
gagcttgctgtccagatccaagaagagatgaagaagttcggtcgatcttctcgcatccga
aacacctgtgtctacggtggtgtccccaagggtcctcaaatccgcgacctctctcgcgga
gtcgaggtgtgcattgccactcccggtcgtctcatcgacatgctcgaggccggtaagacc
aacttgcgtcgtgttacctacctcgtcctcgacgaggctgatcgcatgcttgacatgggt
ttcgagccccagatccgcaagatcattggtcagatccgacctgaccgacaaaccctcatg
tggtccgctacctggcccaaggaagtccgtgctctcgcttccgacttcctccaggacttc
atccaagtcaacattggttccatggagcttgctgccaaccaccgaattacacaagtcgtt
gaggttgttaccgagatggagaagcgtgaccgcatgattaagcacatggagaaggtcatg
gagaacaaggagaacaagatcctcatttttgtcggcacaaagcgagttgctgacgagatc
acccgattccttcgccaggacggatggcctgcgctttccattcacggcgacaagcagcag
aacgagcgtgattgggtccttgaccagttcaagaccggaaagtcccccatcatggtggct
accgatgtggcctcgcgtggtattgatgtgcgcaacatcacccatgtgttgaactacgat
taccccaacaactctgaggactacattcaccgaatcggtcgtaccggtcgtgctggtgcc
atgggtaccgccattaccctcttcactactgataatcagaagcaggctcgtgaccttgtc
aatgtcctccaggaggccaagcagcagatcgatccccgtctcgtcgagatgacccgatat
ggtggcggcggcggcggtcgcggctatggtggatggggtcgcggccgaggcggtggcaga
gactgggatgatgatgtcgtgttgagtggtatgaaaacactcaacggcggagattag
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