Fusarium pseudograminearum: FPSE_00323
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Entry
FPSE_00323 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03440
Homologous recombination
fpu03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FPSE_00323
03450 Non-homologous end-joining
FPSE_00323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
fpu03032
]
FPSE_00323
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_00323
DNA replication proteins [BR:
fpu03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
FPSE_00323
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
FPSE_00323
BRCA1-C complex
FPSE_00323
NHEJ (non-homologous end-joining)
MRX complex
FPSE_00323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
SbcC_Walker_B
AAA_13
AAA_29
DUF1664
AAA_22
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20358943
NCBI-ProteinID:
XP_009251718
UniProt:
K3VV11
LinkDB
All DBs
Position
1:2207180..2211163
Genome browser
AA seq
1307 aa
AA seq
DB search
MSRIDKLSISGVRSFSPSVREAIQFNTPLTLIVGYNGSGKTTIIECLKYATTGELPPNSK
GGAFIHDPKLCGEKEVLAQVKLQFRSINDRQHVATRSVQLTVKKTTRSQKTLDSSLVVVN
NGERTTTSTRQAQMDEMIPERLGVSPAILDAVIFCHQDESLWPLSEPAALKKRFDEIFEA
MKYTKAIDNLKVLRKKQVEQLGKLQNDEAHNKVNKDRGDRAEKRMKALQAEIEGSRETCE
SISAEMEETQEKIRTTRETANSHLAIVQNLDTKREQLEYREEAVKELKSTIEELHDDDGK
LESDLAHYEDRMQHLQDDADQNKAQYNELQKELGQSRKELSAKLSEQGKHQSDKDKYERQ
LKIQKEMIQEAAQSYGFSGFDGDLPDSQVKSFNDRLQKLLAEKKRELERLQKENSSELDQ
ATGVITELEGRKAARTQDRVSAKQRMSAIEKRTAVLQNESSQIDVDEGAKAVLDGQMQDL
DSRFKTAQKTFENADWDRQLSDENDKLHSLESDNDRLGRELVECTRLASERAQLDYRRKE
LNDRKRKLDTLTSTWKPKLDKVLGSDWEPQTLESKFQALVKNQNKVVSEAQKRRDQTRQK
QQKVDFRLRTTKESRDKKAKEAATCQQQVVNALLTVRDNAIVDDYKEEVEAAESQVEELR
NDLSLFDALVDYYTKCKRLLDTKRKCLLCDRHFDESQAAGMERLSKRIDKHLDPKGKVDT
EKDLKEMVSSLEKLRSARGSYDTYERLTAELPSLREECKTTEAEFDALERQVEEQASIVS
TEEEKQKDLEDMSKTVANITQTIRDIAESETQVDRIMSQQMSGGATRSPDEIHELQASLS
DQMRTLKNRISKLTTDRQRTKDQLNSLELEKSELRNKISRAAGQLDKKQDLQNQIQALKE
EVSHQRDVIQRADDELETIEPSITEARSARDEVLRHGRAKEQVIVDARDNVANSVNEMKM
MDADIQGYIDRGGPSNLASNQRAIATLEKTIASTEKEVTDLTVRTNKLKQDIDNGDRKKK
NIKDNLNYRKNLRTIDVIRQEIAELEERNADEDYERLQAEARMQENHYNRLLAERGSVMG
TMKTKDEELGRLLQEWEMDYKDAKKKYRESHIRVETTKAAIEDLAQCSSAVDKAVMQFHS
MKMAEINRIAGELWQSTYQGTDIDTILIRSDNESNTGKRNYNYRLCMVKQDTEMDMRGRC
SAGQKVLASIIIRLALAESFGVNCGLIALDEPTTNLDRDNIKSLAESLHMIIKARQAQSN
FQLIVITHDEDFLRHMRCSDFCDSFFRVRRDERQNSVISRESITKIF
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgtctagaatcgataagctttcgatttcgggtgtccgatccttcagcccttctgttcga
gaggctattcagttcaacacccctctaactctcattgtcggttacaacggctccggtaag
acgacaattatcgaatgtctgaagtatgccaccactggcgagttgccacctaacagcaag
ggcggtgctttcatccatgaccccaagctctgtggtgagaaagaagttttggcccaagtg
aaactacaattccgatccatcaacgaccgtcaacatgtcgcgacccgaagtgtacagctt
actgtcaagaagacgacccgctcccagaagaccctggacagctccctcgtcgttgtgaac
aatggggaacgaacaaccacatcaacccgacaggcccagatggatgagatgataccagag
cgccttggtgtatcacctgcaattcttgatgctgtcattttctgtcaccaagacgagtct
ctctggccgttgagtgagccagccgccttgaagaaacgtttcgatgaaatattcgaggct
atgaaatataccaaagccatcgataacctcaaagtgcttcgaaagaagcaagttgaacaa
ctgggcaagcttcagaacgacgaggctcacaacaaggtaaacaaggatcggggcgaccgt
gctgagaagaggatgaaggccttgcaagctgaaatcgaggggtctcgtgagacttgcgag
tccatcagtgctgagatggaagaaactcaagagaaaatcaggaccacccgggaaacagca
aatagtcatcttgcgatcgtgcaaaacctcgacacaaagcgcgagcagcttgagtacaga
gaagaggcggttaaagagctaaagtccactattgaggagctccatgatgacgacggcaaa
ttggaaagcgatctggcacattacgaggatcgtatgcagcacctccaagacgatgccgac
caaaacaaggctcagtataatgagttgcagaaggaattgggacaatcacggaaggaactc
tctgctaagctttccgagcaaggcaagcatcagtcggacaaagacaaatacgaacgccaa
ttaaagatacaaaaggagatgatccaagaagccgctcagtcttatggtttctcgggcttt
gacggggatctccccgacagccaagtcaagtcatttaatgaccgccttcagaagctcctt
gctgagaagaaaagggagttggagcgcttgcagaaggagaactcttccgaattagatcag
gctaccggtgtcatcaccgagctggagggccgcaaagctgcccgcactcaagatcgcgtg
tcagccaaacaacgaatgagcgccattgaaaagcgcactgcggtgctgcaaaatgagtcg
agccagatcgacgttgacgagggtgccaaagctgtactcgatgggcagatgcaagatctt
gatagcaggttcaaaacagcccagaagacttttgagaatgcggattgggaccggcaacta
tcagatgaaaacgataagctgcattcactcgagagtgacaacgataggcttggtagagag
ctcgtcgagtgtactcgtcttgcgtccgaaagagcccagcttgactacaggaggaaggaa
cttaacgaccgcaagcgcaaacttgacaccctgacaagtacttggaagcctaagctggac
aaggtccttggcagtgattgggaaccacaaactttggaatccaagtttcaagcgttggtt
aagaatcagaataaggttgtttctgaggcccagaagcggcgcgatcagacccggcagaag
caacaaaaagtagatttccgcttgagaaccaccaaagagtcccgcgacaagaaagccaaa
gaggcggctacttgtcaacaacaagtggtcaatgcccttctcacggttcgtgacaacgct
atcgtcgatgattacaaggaagaagtcgaggctgctgaatcgcaggtcgaggaattgcgc
aatgatcttagtctcttcgacgcactcgtggattactacaccaaatgcaagcgtctgcta
gacacgaagcggaaatgtttgctttgtgatcgtcacttcgatgagagtcaagctgcaggc
atggaacggttgagcaagaggatagacaagcatcttgacccgaagggcaaggttgacaca
gaaaaggatctcaaagagatggtttcgagtctcgagaagctgcgatctgcgcggggttct
tacgatacatacgagcgattgacggctgaactgccttctctccgcgaagagtgcaagact
acagaggcagaattcgacgccttagagagacaagttgaagagcaagcgtccatcgtatcg
actgaggaggagaaacaaaaagaccttgaggacatgtccaagactgttgccaacatcacg
caaaccatcagagacattgccgagtcggaaacccaggttgatcgcatcatgtctcagcag
atgtcaggcggggcaactcgaagtcctgacgagatccatgagctccaggctagcttgtct
gatcagatgaggactctaaagaaccgtatctcaaagttgactacggaccgccaacgtaca
aaagatcaactcaactctctcgagctagaaaagagtgagctgagaaacaaaatcagccgt
gcggctggtcaactagacaagaagcaagatctgcaaaaccagatccaggcactgaaggaa
gaagtatcccaccaacgagatgtcattcagcgcgccgacgatgagttggagacaatcgaa
cccagcattacagaggcaaggtctgctcgtgatgaagttcttcggcacggtcgggctaag
gaacaggttattgttgacgctcgtgacaacgtcgcaaactcagtcaatgagatgaaaatg
atggatgctgatatccagggctacatcgatcgtggtggtccctctaacctggcatccaac
cagagggccattgccacactcgagaagacaatcgcgagtaccgagaaggaggttacagat
ctcacggtccgtacaaacaagctgaagcaagacattgacaacggagaccgtaagaagaag
aacatcaaagacaacctcaactatcgcaagaatcttcgtactatcgatgtcatccgtcaa
gagatcgctgaactagaggagcgcaatgccgacgaggactacgaacgtcttcaagctgaa
gcccgtatgcaagagaatcactacaatcgtcttctggcagagcgtggttccgtgatggga
actatgaaaaccaaggacgaggaacttggaagattacttcaagagtgggaaatggattac
aaggacgccaagaaaaagtaccgagagtcgcatatccgtgtggaaacgaccaaagccgct
attgaggatctggcccagtgtagctcggctgttgacaaagctgtgatgcagttccactca
atgaagatggctgagataaatcgcatcgctggcgaactatggcagagtacctaccaagga
accgacattgacacaattctcatccgttcggataatgagtcaaacacaggcaaacgcaac
tacaactatcgactctgtatggtgaagcaagacaccgagatggatatgcgtggccgatgt
tctgctggacaaaaggtgctcgcatccatcatcattcgtttagcactggctgaatcattt
ggtgtcaattgtggtctcattgcgctggacgagcctacaaccaatctggatcgcgacaac
atcaagagtctagcagaaagcttgcacatgatcatcaaagctcgtcaggcccagagtaac
ttccagcttattgtcatcactcacgacgaggactttttgcgacatatgaggtgtagcgat
ttctgtgacagtttcttccgcgtcaggcgtgacgagcgacagaatagtgtcatttcaagg
gaaagtattacaaagatattctaa
DBGET
integrated database retrieval system