Fusarium pseudograminearum: FPSE_00469
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Entry
FPSE_00469 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03013
Nucleocytoplasmic transport
fpu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FPSE_00469
03015 mRNA surveillance pathway
FPSE_00469
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_00469
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPSE_00469
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FPSE_00469
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Annexin_3
Cas3-like_C_2
CMS1
Motif
Other DBs
NCBI-GeneID:
20359089
NCBI-ProteinID:
XP_009251864
UniProt:
K3VUS7
LinkDB
All DBs
Position
1:complement(9908196..9909816)
Genome browser
AA seq
488 aa
AA seq
DB search
MADLASRITKPDEVAAETPVETPAETAPAASGELGQADGNIEDLGGSGLQEPEWDVEVSL
SELQNNEATPFHSATTWQDLGLREDLLKGLLSLNFLKPSKVQGKSLPLMLSDPPRNMLAQ
SQSGTGKTAAFVTAILSRVDFSKPDQPQALALAPSRELARQIEGVINAIGRFVENKKVAA
AIPGVLPRGEPVRASVIVGTPGTVMDIIRRRQLDISQLRVLVLDEADNMLDQQGLGDQCL
KVKNMLPKEIQVLLFSATFPENVMKYAGKFAPNAHSLKLQRSELTVKGISQMFIDCPDDN
MKYDILCKLYGLMTIGQSVIFVKTRDSANEIERRMVADGHKVSALHAAFDGVERDNLLTK
FRQGENKVLITTNVLARGIDVSSVSMVINYDIPMKGRGDTEPDAETYLHRIGRTGRFGRV
GVSISFVYDKKSFDALSKIAEMYGIDLVKLDTEDWDEAEERVKEVIKKNRAQASYAPSAT
EPKAAAGA
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcttgcgagccgcattacaaaacccgacgaggtcgccgctgagactcctgtc
gagacccctgccgagaccgcacccgctgcttctggtgagcttggccaggccgatggcaac
atcgaagacttgggtggctccggcctccaggagcctgaatgggatgtcgaagtctccctc
agcgaactccagaacaatgaagccacaccgttccattccgccactacctggcaagacctg
ggccttcgtgaggacctactgaagggtctcctctctctcaacttcttgaagccctccaag
gtccagggcaagtccctccccctgatgctcagcgatcctccacgaaacatgctggcgcag
tcacagtctggtactggcaagaccgctgccttcgtcaccgcgatattgtcgcgtgtcgac
ttcagcaagcccgaccagccccaagcactggctcttgcgcccagtcgagagcttgcccga
cagattgaaggagttatcaacgccatcggacgtttcgttgagaacaagaaggttgctgct
gcaatcccaggcgttctgccccgtggagaacccgtcagagctagtgtcattgtcggtact
ccaggtacagtgatggacattattcgacgccgacagctggacatctctcagctccgcgtt
cttgtcctggatgaggccgataacatgctcgaccagcagggcctaggcgatcagtgcctg
aaggtcaagaacatgctccctaaggaaattcaggtgctccttttctccgccactttcccc
gagaacgtcatgaagtatgccggcaagtttgcacccaacgcgcatagcctcaagttgcag
cgcagtgaacttaccgtcaagggcatctctcaaatgttcattgactgccctgacgacaac
atgaagtatgacattctttgcaaactttatggtttgatgacgatcggccagtcggtcatc
tttgtcaagactcgagatagcgccaacgagatcgagagacgaatggtcgctgatggccac
aaggtctctgcccttcacgccgcttttgatggagttgagcgagataacctcttgaccaag
ttccgtcaaggcgagaacaaggttctcattaccaccaacgtcctggcccgtggtatcgat
gtttccagtgtatccatggtcatcaactatgatattcccatgaaggggcgaggcgacacc
gaacccgatgccgagacctaccttcaccgtattggccgaactggtcgatttggccgtgtc
ggcgtcagtatcagcttcgtttacgataagaaaagcttcgatgccttgagcaagattgcc
gaaatgtacggtattgacttggtcaagctggacactgaagactgggatgaggccgaggag
cgtgtgaaggaggtcatcaagaagaacagagctcaagcctcatacgcccccagtgcgact
gagcctaaggctgctgcgggtgcttag
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