Fusarium pseudograminearum: FPSE_00789
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Entry
FPSE_00789 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_00789
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_00789
Spliceosome [BR:
fpu03041
]
Complex C
Other components
Complex C specific factors
FPSE_00789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
DEAD
AAA_19
AAA_30
TrwB_AAD_bind
nSTAND3
Cas3-like_C_2
T2SSE
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
20359409
NCBI-ProteinID:
XP_009252184
UniProt:
K3V1E0
LinkDB
All DBs
Position
1:4992636..4994723
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AA seq
678 aa
AA seq
DB search
MADLDLDASFIPALHKPAALLPIAKHRESLLYVIEKHPVTIVIGQTGSGKTTQIPQFLDQ
AGWCSDGKIIGVTQPRRVAATTVAVRVAEEVGCELGKEVGYSIRFEDVTSASTKIKFLTD
GLLIREALVDPLLTRYSVIMVDEAHERSISTDVLLGLLKKIRRKRPELRIIVSSATLQAK
EFLDFFTSSSDDQTNSKNGDNEKKDEISAIVSLEGRTYPIDTLYLESPAENYVEKAIDVV
FDIHTQEGEGDILVFLTGREEIDNAIQAVSERMMDLSSKYGPLMPLPLYAGLSTEQQMYV
FDKPSEGTRKVVFSTNIAEASVTIDGIVFVIDSGFVKLRAYDPRTGIESLTATPVSKAAA
SQRAGRAGRTKPGKCFRLYTEQSYQSLQDANIPELQRSNLAPVVLQLKALGIDNIVRFDF
LSPPPSELMAKALELLCALGALDEYAKLTRPMGSRMAELAVEPMMAKTLLAAPSFGCLSE
MLTIAAMTSLGGSVWFSHEGERKKMETSRRKFAVEEGDHLTLLNAYQAFVTKGRKEAKFC
HENNLNYKSMSRAISIRAQLKRYLERFSINVDETLAGQISSEDNAKKAEQIRRCLTSGYF
AHAARMQPDGTFRNVEGNMVLHVHPTSLMFNRKADWVIFHEAMETGSKIFIRDVTKIEKT
WLLEYAPEFYQITTDRRG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggccgacttggacctggatgcttcatttattccagctctacacaaaccagcagctttg
cttcctatcgcaaaacaccgcgaaagcttgctatatgtcatcgaaaaacaccccgtcacc
atcgtcataggccaaacaggctctggaaaaacaactcagatcccgcagttcttggaccaa
gcaggatggtgttcagatgggaaaataatcggtgtcactcagcctcgccgtgttgcagca
accacagtagcggtacgcgttgctgaagaagttggctgtgagctaggcaaagaggttgga
tactcaattcgcttcgaggatgtgacctcggcctcaaccaagataaagtttctcacagac
ggtctcctcatcagggaggctcttgttgacccgctgttgacgcgctactcagtcatcatg
gttgatgaggcacatgagagatctatcagtaccgatgtcttactgggtcttctaaagaaa
attcgccggaagcgacctgagttgcgtatcatcgtcagtagtgctaccctacaagcaaaa
gagtttttggactttttcacatcgagcagtgatgatcaaaccaacagcaagaacggtgac
aacgagaagaaagatgagattagtgccatcgtaagtcttgagggaagaacatatcccata
gatacactatatctagagtcaccggcagaaaactatgtcgagaaggctatcgatgtcgtt
ttcgacatacatacccaagaaggcgaaggagatatactagtcttcttgactggtagagag
gagattgacaatgcaatacaggcagtcagcgagcgcatgatggatcttagttccaagtac
ggccctttgatgccattgccactatatgccggcttgtcgacagaacagcagatgtatgtg
tttgacaagccatctgagggcactcgaaaggtcgtattctcaacaaatattgcagaagcg
tcagtcacaatcgatggaatcgttttcgtgattgatagtggctttgtgaaattgagagca
tatgatccaaggacaggcatagagtcactcactgccacaccggtttccaaggcagctgca
tctcaacgtgctggacgtgctggacgaacaaaacctggaaaatgtttccggttatatacc
gagcaaagctaccaatcattgcaagatgccaatattcctgagctacagcggtcgaatctg
gcacctgttgttctccaactcaaagctttgggtatagacaatattgtgcggttcgatttt
ctctccccaccaccgtctgaacttatggcaaaagccctcgagctactatgcgcccttgga
gctctggacgaatatgccaagcttactcgaccgatgggttcgaggatggctgagctagct
gttgaaccgatgatggccaaaacgttactggcagcaccatcatttggatgccttagtgag
atgttgaccatcgctgccatgacaagcctcggaggcagtgtgtggttctcacacgagggt
gaaagaaagaagatggaaacgtcacgcagaaagtttgccgtcgaggagggcgaccatctg
acactgctcaacgcctaccaagcctttgtcaccaagggccggaaagaagcaaagttttgt
cacgagaacaacctcaactacaagtcgatgagtcgagcgatcagcattcgagcacaacta
aaacggtatcttgaacgattcagtattaatgtggatgaaactctcgccggtcaaatatca
tcggaagacaacgccaaaaaggcagagcagatccgccgttgtcttacatcgggctacttt
gcccatgcggcaaggatgcagccagacgggacgtttcgcaacgtggagggtaacatggtt
cttcacgtacatccgacttcactcatgttcaaccgcaaggcagactgggtcatcttccat
gaagcgatggaaactggtagcaagatattcatcagggatgtcaccaagatcgagaagacc
tggctcttggagtatgcaccagagttctaccagatcacgaccgatcgacggggatga
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