Fusarium pseudograminearum: FPSE_01330
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Entry
FPSE_01330 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_01330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_01330
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_01330
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_01330
Spliceosome [BR:
fpu03041
]
Complex A
U2 snRNP components
U2 related factors
FPSE_01330
Complex B
FPSE_01330
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FPSE_01330
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
Helicases
FPSE_01330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
WHD_HA2
SRP54
AAA_19
Cas3-like_C_2
NB-ARC
nSTAND3
Motif
Other DBs
NCBI-GeneID:
20359950
NCBI-ProteinID:
XP_009252725
UniProt:
K3V055
LinkDB
All DBs
Position
3:<5539280..>5541675
Genome browser
AA seq
768 aa
AA seq
DB search
MSDFMGGKRSSADADESTRKKAKKEGGDDEKYNPYLAHMHDNGDSNGNGQEPSPDSPLAG
MKRQHTTAKQAAKAEDSESNPFTGRPHSQKYFQILQSRRDLPVTKQRQEFLDKYHSTQIL
VFVGETGSGKTTQIPQYVVYDELPHLTGKLIACTQPRRVAAMSVAQRVADEMDVTLGEEV
GYSIRFEDMTGPQTMLKYMTDGMLLREAMHDHEMSRYSCIILDEAHERTLATDILMALLK
QISMRRPDLKIIIMSATLDAQKFQKYFNDAPLLAVPGRTHPVEIFYTPEPERDYVEAAIR
TVLQIHASEPEGDILLFLTGEDEIEDACRKISLEADELMREVDAGPLAVYPLYGTLPPHQ
QQRIFDKAPAPLRKGGRPGRKVIISTNIAETSLTIDGIVYVVDPGFSKQKIYNPRIRVES
LLVSPISKASAQQRAGRAGRTKPGKCFRLYTEKAFKKELIEQTYPEILRSNLANTVLELK
KLGVEDLVHFDLMDPPAPETMMRALEELNYLACLDDDGELTTLGSMASAFPLDPALAVML
ISSPEFYCSNEILSITSLLSVPQIFTRPANNRKRADEMKAQFAHPDGDHLTLLNAYHAFK
GQATSDPNSAKQWCHEHFLSFRHLSSADNVRAQLKRIMETHGLELVSTPFEDKNYYTNIR
RALLAGFFMQVAMKESSGKLYRTVKDDQAVLIHPSTVLRTEFDWVLYNEFVLTSKQYIRT
CTGIRPEWLLEIAPTYYDIDSFEQGDVKRSLARAAEKKRRKEAMKAGR
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgtctgactttatgggaggaaagcgatcaagcgccgacgccgacgagtcaactcgaaag
aaggccaagaaagaaggcggcgacgacgaaaagtacaacccttaccttgctcacatgcat
gacaacggtgatagcaatggcaatggccaggagccttctcccgactctcctctggccggc
atgaagcgacagcacaccaccgctaagcaggccgccaaggctgaggattcagagtcgaac
cccttcaccggccgaccgcattcgcagaagtacttccagattctccagagccgtcgcgat
ttgcccgtgaccaagcaacggcaggagtttctcgacaagtaccactcaacgcagattctc
gtctttgtcggtgagacaggttccggaaagaccactcagatcccccaatatgtcgtttac
gacgagctacctcacctcactggcaagctcatcgcttgtacccagccgcgtcgagtcgcc
gccatgtctgtcgcgcagcgtgtcgctgacgaaatggacgttaccttgggtgaggaagtc
ggttacagcattcgtttcgaggacatgacaggtccccagaccatgctcaagtacatgacc
gacggtatgcttctgcgcgaggccatgcacgaccacgagatgtctcgctatagctgcatt
attctcgatgaggctcacgaacgtacccttgcgaccgacattcttatggctctgctcaag
cagatctccatgcgccgccccgaccttaagattattatcatgtctgctactcttgacgct
caaaagttccagaagtacttcaacgacgcacctttactcgctgtccctggtcgaacccac
cctgtcgagatcttctacacccccgagcctgagcgcgattatgttgaggctgccataaga
actgttctccaaatccacgcttcggagcctgagggtgatattctgctcttcttgactggt
gaagatgagattgaagacgcttgtcgcaagatcagtcttgaggctgatgagttaatgcgc
gaggttgacgccggtcctctcgccgtgtaccctctttatggtactctacctcctcaccag
cagcagcgcatcttcgacaaggctcctgcacctcttcgcaagggcggtcgccctggccgt
aaggtcatcatttccaccaacatcgcggagaccagtttgaccattgacggtatcgtctac
gtcgtggaccccggtttcagcaagcagaagatttacaaccctcgtatccgtgtcgagtcc
cttttggtttcgcccatctccaaggcctcggcccagcagcgagctggtcgtgctggtcgt
acaaagcccggaaagtgtttccgtctttacacagagaaggcattcaagaaggaactgatc
gagcagacataccccgagattctgcgctccaatcttgccaacacagttttggagctcaag
aagctcggtgtcgaggatcttgtccacttcgatcttatggaccctcccgctcctgagact
atgatgcgagctcttgaggagctcaactatctcgcctgtctcgatgatgatggtgagctg
accactctcggtagcatggcctcggcgttccctctggatcccgctctggctgtcatgctc
atctcttctcctgagttttactgctccaacgagattctttccattacttccctgctctca
gtgccccaaatcttcactcgccctgccaacaaccgcaagcgcgcagatgagatgaaggcg
cagtttgctcaccccgatggagaccacctgaccctgctcaacgcctaccacgctttcaag
ggccaggccacatcagaccccaacagcgccaaacagtggtgtcacgagcacttcctctca
ttccgacatctttccagtgccgacaacgttcgcgctcagcttaagcgcatcatggaaacg
catggactcgagcttgtctcaacgccatttgaggacaagaactattacaccaacatccga
cgcgcactgcttgccggtttcttcatgcaggtcgccatgaaggagagctctggcaagctc
taccgcaccgtcaaggatgatcaggctgtcttgatccacccctcaactgttcttcgcacc
gagtttgactgggtcctttacaacgaattcgttctcacttcaaagcaatacatccgtaca
tgcacaggtatccgacccgaatggctactggaaattgcccccacctactatgacatcgat
agctttgagcaaggcgatgtcaagcgttctcttgcacgcgctgcagagaagaagcgtcgc
aaggaggccatgaaggccggtagatga
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