Fusarium pseudograminearum: FPSE_01388
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Entry
FPSE_01388 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
fpu03036
]
FPSE_01388
Chromosome and associated proteins [BR:
fpu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FPSE_01388
microRNA pathway
RISC loading complex
FPSE_01388
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
Helicase_C
ResIII
DEAD
DSRM_2
RdRP
Motif
Other DBs
NCBI-GeneID:
20360008
NCBI-ProteinID:
XP_009252783
UniProt:
K3UZZ0
LinkDB
All DBs
Position
Unknown
AA seq
1860 aa
AA seq
DB search
MHSTAVDFSKTGIPVDVKKLPKPPFYRPDFLATVPPLKVYDIDQIDLIVDHQEPVHEEDT
MGQAKHKYYRSDKILGRLYRNVNEKKIWDEDIHRSTTMDGPSIWDQLLTTVKREVVGYNL
GIDWTRKSEQAWKIRNLYESTMVDKMWHFSENPRSCLTEVEVFCGFILNKKGSQTARQRD
SSIKLKEEIDRIMTWFVKMIRDQGQRNDLETFGTRTETSSAPDRRREDVIELCWACVAVA
CLKKEDAPVTYHATGELQSFRVLAACCLLKELNNLTRKMNSVSGGGFTGVGSGRRGRQQT
ALAIRCLNRPFQLILATTTADLPLRQMATESGVSSSLTSRPMCPDVAPNGTSDSLVPEGN
ALADMDTSDDDCRRFVVSQEKPSTITEKKRLDNAAFRDWVVNTQREAMRNSLTAPDDLRN
QSVSHLITASENRMIITTPREYQIELFERAKRENTIVVLPTGSGKTLIAALLLRHCLEQE
LEDRAAGKPKRVAFFVVEKVALCFQQFAVLNCNLGAYPVTKFWGKMSGTKTKDYWNKQFS
DNMAIVCTAQILLDCLNSNFINMSQINLLVFDEVHHAKKEHPYARIIKNHYVHHEGDKPR
ILGMTASPVDAQTKDFEGTAVEIETFLCSKIATVSGDVLANSMDLRKQLQEKAYYDALRF
PEESKTALRELIVGQILHNALFKASLEFTEEASSTLGSWCADRYWHLLITEDETMQLAAK
TDREFAKSFASIKADGATDAVRRVRDIVKNNVLGIVRPSSPGLSVKVKKLHEILLNAFTF
NGTKRCIVFVEKRYTACLLSDLYQQPEMGIRGMNASYMIGRQSSISNIGGMSFRDQVITL
QRFKRGDVNCLFATPVAEEGIDIPDCDLVVRFDLFNSVIQYLQSRGRARQQRSKYITMLE
HGNSKQIRSLKQAERDAASLEKFIMSLPSDRKLQDESMDPVTATQNELTTQKVYVMPSTG
ARLTFSISLGVLAKFTSSLSSSDNGNLEFVVSKQGPTFIADVILPDSSPLRSMSGIPQRS
KALAKCSAAFEACVLLIDKKYIDEHFQPVFVKALPVLRNARLAADSGKKADYNMRLRPEA
WSVRGACKTLFATMIILENPGALGENRPSRPLMLLSRNKLPKLPEIPLFFGNGCSSVVKL
IASENPLELSPCEIQGILRFTLRIFGDVFSKEFNAGTDQMPYFLAPCTSIQSSTLIRARI
DWQIVEIVKEFESLSWWGAPDEFFVDKFVTDPLDRGRKLIIRGIDKSKKPSDSTPVGVPE
PRSRSYKSVQPTIKEYSNSLFLNSRRKAQWQDDQPVVKAELLSLRRNLLDEFQTDENLNK
DCFVILEPLRVSPIPIDVVFMTMTFPAIINRIESILIALDACASLDLTIPPALALQALTK
DGGGTGDLDVKQSNFQPGMGDNYERLEFLGDSFLKMATTISLFTLIPESNECGYHAERVL
LICNQNLFNHGVEHNLHQYIRSKSFDRRAWYPDLPLKKGKVTKTTMTHDLADKTIADVCE
ALIGAAYLSGEEGNMDMGVKAVTRMVKSKNHEMEFFRDYFAAFKVPPWHTAKSTTLQRRL
VDCVAKVTGYRFNSSALLQSVFKHPSWPYEAVPDYQRLEFLGDALLDMVVVDFLYKRFKL
ADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSSLTGQISEYVAELELAKEDAHKV
AKANRTPTRMDFWLHASLPPKVLADVAEALIGAMFVDAKYNYSVVNQFFTRFVEPYFTEM
VLYDTFASQHPVTVLCKKMQQELCCVNWRISVGSVPCTVEEGMAALRDSDVIAVFMAHQK
VILSTTSKNSRCAKIAVAKQALKKIDSFEGGVVATKEALGCDCQLKKFQDEWRLDYGTAV
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgcactcgacagctgttgacttctcaaaaactggtatcccagtagacgtgaagaaatta
ccaaagccgccattctatcgccctgacttccttgcgacagtcccccccctcaaggtttac
gacatagatcaaatcgatcttatcgtggatcatcaagagcctgtccatgaggaggacact
atgggtcaagccaagcacaaatactataggtcggacaagatccttggacgtctataccga
aatgtcaacgagaagaagatctgggacgaagatattcatcgcagcaccaccatggacgga
ccctctatttgggatcagttgctgacgactgtaaaaagagaggttgtcgggtacaatctt
ggtatcgattggacacgcaagtctgaacaggcttggaagattcgtaacctgtacgaatcc
accatggtagacaagatgtggcatttctcggagaatccgcgctcatgtctgacggaagtt
gaagtcttttgcggtttcatcctgaacaagaaaggcagtcagacagcgcgccagcgagac
tcatctatcaagttgaaagaagagattgatcgcattatgacgtggtttgtcaagatgatc
cgagatcagggtcagaggaacgatttagaaacgttcggcaccaggactgaaacctcttct
gctccggaccggcggcgagaggatgttatagaactgtgttgggcatgtgtagctgtggca
tgcttgaagaaggaagatgcgcccgtcacgtatcatgcaacaggagagctacagagtttc
cgcgtactcgctgcatgctgcctcttgaaggagctgaacaacttgactaggaagatgaat
agcgtttccggaggtggctttaccggtgtggggagtggccggcgaggccggcagcagaca
gcacttgcgatacggtgtctgaacagaccattccagctcattttggcgaccacaacagca
gacctaccgttacgtcaaatggccacagagagcggggtcagcagtagcttgacatcaaga
ccaatgtgcccggacgtggcaccgaacggcacatcggacagtcttgtgcctgaagggaat
gcactggcggacatggatactagcgatgatgattgccgtcgcttcgttgtcagccaagaa
aagcccagcaccatcaccgagaagaaacgacttgataatgcggcgttccgcgattgggta
gtcaacacgcagcgcgaagccatgcggaactcactaacggcccctgacgaccttcggaat
cagtccgtttctcatcttattacggctagcgaaaacagaatgatcatcacaacaccccga
gagtatcaaattgagctctttgagcgggcaaaacgtgaaaataccatcgtagttttgcct
accggttcgggcaaaaccctcattgctgcactgcttcttcggcattgccttgaacaggag
cttgaggatcgtgcagcaggaaaacccaagcgggtagccttttttgtcgtagaaaaggtt
gcgctctgcttccagcaatttgcggttctcaactgtaacctcggagcctaccctgtcacg
aagttctggggcaaaatgagtggcacgaagacaaaagactactggaataagcagttcagt
gataacatggcgattgtctgcacagcgcaaattcttcttgattgcctcaacagtaacttc
atcaacatgtcccagatcaatctcctagtatttgacgaggtccaccatgcaaaaaaagag
cacccgtacgctcgcatcatcaaaaatcattacgtccaccacgaaggagacaaaccacgg
atccttggtatgactgcctcacctgtagatgcgcagacaaaggacttcgagggaactgcg
gtcgagatagagacctttctttgcagtaaaatcgccaccgtttctggcgacgtgctagca
aattctatggatctgcggaagcaacttcaggagaaggcctattatgatgcattgaggttc
ccagaagaatcgaagacagctttgcgagagctcatcgttggacaaatacttcacaacgcc
ctgttcaaagcatcgctcgagttcactgaagaagcctcctcgactctgggctcctggtgt
gcagatcgatattggcacctcctcatcacggaagatgagactatgcaactagcagctaaa
actgaccgggaatttgccaagagctttgcatcaataaaggcagacggcgcaacggacgca
gtcagacgcgtcagagatatcgtcaagaacaacgtacttggaatagttcggccatcctct
ccggggttatccgtaaaggtgaagaagctgcatgaaattctactaaacgccttcacattc
aacggtaccaaacggtgcatcgtgtttgtagaaaaaaggtataccgcctgcctactgtca
gatctatatcagcaaccggaaatggggatccgaggcatgaacgcttcttacatgattggc
cgtcagtcaagcatatcgaatatcggcggtatgtctttccgagaccaggtgatcaccctt
caaaggttcaagcggggagacgtcaactgcctctttgcaacgccagtcgctgaagaaggt
attgatatcccagattgtgacctagtggtccgattcgatctcttcaactccgtgatacag
tacctgcagtctagaggacgagctcgacaacaacggtcgaaatatattaccatgctggag
catggtaactcgaagcaaattcggagcttgaagcaagcggaaagagatgcggcttctctt
gagaaattcatcatgtctctcccctcagaccggaaactgcaagatgaatcgatggatcct
gtaaccgcaactcaaaacgaattgacaactcaaaaagtctatgtaatgccctcgactggg
gctcgcctcacattttctatcagcctcggggtccttgctaagtttacgtcttcactttca
agtagcgataatggcaacctggaattcgttgtctccaaacaaggacctactttcatcgct
gacgtcatcctccccgattcgtctcctctcaggtccatgtcgggaatcccgcagcgcagc
aaggcgttggccaagtgctctgcagcttttgaggcatgtgttttgttgatcgacaagaaa
tatatcgatgaacacttccagcccgtttttgtcaaggctcttcctgttttgaggaacgct
aggctagctgctgactccgggaagaaggccgattacaacatgagactaagaccggaagct
tggtcagtgcgaggagcgtgcaagacacttttcgcaacgatgatcatccttgagaatccg
ggagcccttggagaaaaccggccaagtcgaccgttgatgctgctctctcgcaacaaacta
cctaagctccctgaaattcctctcttttttggcaacggatgctcgtccgttgttaaattg
atagcgtctgaaaatcctctggagctaagcccgtgtgaaatccaagggatactccggttt
accctcaggatctttggagatgttttcagtaaagaattcaacgccgggaccgaccaaatg
ccttacttcttggcgccttgtacaagcatccagagctcaactctaattagggctcgaatt
gattggcagatcgtagagattgtcaaggaattcgaatctctcagttggtggggtgctcct
gatgaattctttgtggataagtttgttacggatccattggacagaggccgtaagctcatc
atcagaggtattgacaagtcgaagaagccttctgattccacgccagtaggagtaccagag
ccgagaagccgatcttacaaaagcgttcaaccaacgatcaaagagtacagtaacagccta
ttccttaattctcgtcgcaaggcccagtggcaggacgaccaacctgttgtcaaagcagag
ttgctgtcgcttcgtcggaatttgctagatgaatttcaaaccgacgagaaccttaacaag
gactgctttgtgatattggagcctctaagggtatctcctatccctattgatgtggtcttt
atgaccatgacatttccggccatcatcaaccgcattgaatcgatattgatcgctcttgat
gcttgtgcctcgctagaccttaccatccctccagcattggctcttcaagctttaacaaaa
gacggtggtggtacaggagatcttgatgtgaagcagagcaactttcaacctggcatgggt
gacaactacgaacggttggagtttctgggcgactcgtttctgaaaatggctacgacaatc
tcactcttcaccctcatcccggaaagcaacgagtgtgggtaccacgctgagcgtgtgctc
ctcatctgcaatcaaaacctcttcaatcacggtgttgagcataatcttcatcagtacata
cggtccaagtcgtttgataggcgcgcctggtatcccgatcttccacttaaaaaggggaaa
gtaacgaaaaccaccatgacacatgacctggccgataagaccattgctgatgtttgtgag
gcgcttattggagctgcctacctctcgggtgaagaaggcaatatggatatgggggtcaaa
gctgtcacgcggatggtcaaaagtaaaaaccacgaaatggagttctttcgtgattatttc
gctgcgttcaaggttcccccatggcacacagccaagagcaccactttacaacggcgtctt
gttgactgtgttgccaaagtcacggggtatcgcttcaactcttcagccctcctccaaagc
gtgtttaagcatccttcatggccctatgaagctgtgccagactaccaacgcctcgagttc
ctcggggacgccctactagatatggttgtggttgactttctatacaaacgattcaagcta
gcagatccccagtggctgacagagcacaagatggccatggtctctaaccagttcctcggt
tgtctatgtgtccaactcaacttacacaagcatcttctctttaccacgtcctcactcact
ggacagatcagtgagtatgttgcggaacttgaacttgccaaggaggacgcacacaaagta
gccaaggcgaacaggactcctacgcgcatggacttttggctccatgcgtctttaccaccg
aaggtcttggcagacgttgccgaagctctcatcggcgccatgtttgttgacgccaagtat
aactattcagttgtcaaccagttttttacccgcttcgttgagccatacttcacagagatg
gtcctctacgatacttttgccagccaacaccctgttacagtcctttgcaagaagatgcag
caggagctctgctgtgtaaactggcgcatcagcgtaggaagcgttccttgtacagtggaa
gaaggcatggccgcgctgagagacagtgacgttattgctgtctttatggcgcatcaaaag
gtcatcctgagtaccacatccaagaatagtcgatgcgcgaagattgccgtcgcaaaacag
gcactcaagaagatcgattctttcgagggcggtgttgttgcaacgaaagaggctttggga
tgcgattgccagctcaaaaaatttcaggacgaatggcgactggattatggcacggcagtc
tag
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integrated database retrieval system
