Fusarium pseudograminearum: FPSE_01484
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Entry
FPSE_01484 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
FPSE_01484
Enzymes [BR:
fpu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
FPSE_01484
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Motif
Other DBs
NCBI-GeneID:
20360104
NCBI-ProteinID:
XP_009252879
UniProt:
K3VSR5
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All DBs
Position
1:3166189..3167861
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AA seq
540 aa
AA seq
DB search
MVNFKYLGALVSAAPALAAFGVTTSGNNLIVDSGNSNGFSVSVSKSDCSINSIKYRGSEY
QYKSQTSHIASGLGSASVQSTVLNNKYIKVTCTAKSGDFDLTHYYVVQNGQSNVYMATDT
KSEPKIGELRYIARLDRSLLPNEIPFGEASNTSGGSAIEGSDVFNVNGQTRSKFYSSQRF
IDNDVWCFQSSGKDVHACMVTHASRSYEKSSGGPFFRDINSNNNGDFSALTFYMNSGHVQ
TEDFRQGFHGPYALSFSRSGVPKAKDVDMTFFNDLSIPGYTADSSRGRVSGTATGVQSGF
QGTVHWFNKDFQYWAYTSSNGAFTSPFMVPGTYTQVLYQGELKVASKSVSVSAGGTASSS
IAANSDITTGKHTSVFRIGNWDGQPTGFRNADKQLRMHPSDKRMSSWGPLTYTVGSSSVG
DFPMAIFKAANSPVTIKFNLPSAISGQATLRIGTTLAFASGRPQVTVGSFKKAFDAPTKI
DSRGVTRGAYRGHGEVYDAVIPAGTLKQGSNTITIEVISGSSGADFLSPNFIFDAVELFY
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacttcaagtatcttggcgctcttgttagcgccgctccggctctggcagccttt
ggtgtcaccaccagtgggaataacctcatcgttgactctggcaactccaacggcttttca
gtctctgtcagcaagtctgactgctcaatcaactctatcaagtaccgtggtagcgagtac
cagtacaagtctcagacttctcatatcgcatctggcctgggatcagccagtgtccagtcc
accgtgctcaacaacaagtacatcaaggtcacttgcaccgccaagtcgggcgactttgac
ctgactcattactacgttgttcagaacggccagagcaatgtctacatggccaccgacaca
aaatccgagcccaagatcggtgagcttcgctacattgctcgtctggatcgctctctgctg
cccaacgagatcccctttggcgaagcctccaacacgtctggtggttcagccatcgagggc
tctgatgtcttcaacgtcaatggccagacccgctccaagttctactcgtctcagcgcttc
atcgacaacgacgtctggtgcttccagagcagcggcaaggacgtccacgcttgcatggtc
actcacgcctcgcgctcgtacgagaagagctctggcggtcctttcttccgtgatatcaac
agcaacaacaatggtgactttagcgctctcaccttttacatgaactcgggtcacgttcaa
accgaagatttccgccagggtttccacggcccctacgccttgtctttttcccgctctggt
gtccccaaggccaaagatgttgacatgacctttttcaatgacctttctatccctggctac
actgccgactcgtctcgtggtcgggtcagcggtactgctactggtgtccagtctgggttc
cagggtactgttcactggttcaacaaggatttccaatactgggcttatacttcatccaac
ggtgctttcacttctcccttcatggtccccggtacttacacccaggttctctatcagggt
gagctcaaggtcgcttccaagagcgtgagcgtctccgctggtggtactgcatcttcttcc
attgctgccaactccgacatcacaactggaaagcacacctctgtcttccgcattggtaac
tgggacggtcagcctacgggtttccgtaacgctgataagcagctgcgcatgcaccccagc
gacaagcgcatgtccagctggggtcctctgacatacaccgtcggctccagctcggtcgga
gacttccccatggccatcttcaaggccgccaacagtcctgttaccatcaaattcaatctt
ccttctgctatctcgggccaggcaaccctccgtattggtaccactcttgcctttgccagt
ggccgacctcaagtcaccgtcggcagcttcaagaaggcctttgacgcgccaaccaagatt
gactcacgaggtgtcactcgcggagcgtaccgtggccatggcgaggtgtatgatgctgtt
attcctgctggtacgctgaagcaaggatccaacactatcaccattgaagtcatctctggt
agctctggtgctgacttcctgagccccaactttatctttgatgccgttgagctattttac
tag
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