Fusarium pseudograminearum: FPSE_02017
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Entry
FPSE_02017 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_02017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_02017
Spliceosome [BR:
fpu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
FPSE_02017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
PRP4
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_RIG_1st
WDR54
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Beta-prop_SPT8
WD40_RFWD3
Beta-prop_DCAF12
Beta-prop_Vps41
Nbas_N
DUF6594
Motif
Other DBs
NCBI-GeneID:
20360636
NCBI-ProteinID:
XP_009253411
UniProt:
K3VUD4
LinkDB
All DBs
Position
1:complement(1422922..1424478)
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AA seq
518 aa
AA seq
DB search
MMHPSRQAYVEDAEPQGIALEDIPDDHDYDISMGGTGVPSEKASAILNQFNRKRLAATIA
VPTDDTRVRAKLREMGEPVTLFGEALVDRRDRLRELLTIQAEITGLENGDIDMGDADDDQ
EEDQEEEFYSRGGPELQQARLKIAEYSLPRAKKRTQFQKAESTIPLRTHVKFRKQVKERL
QAFELQGSQTVGERHVSMTRISPNGELVAVGNWGGQVKLVEIPSLNQKMNFRGHTNKISG
LSWFPGATLQENNVSPDSVNLASGGAEGSIHMWSLNQDTPLATLEGHSQRVCRIEFHPSG
RHLASASEDTSWRLWDVETTTEVLLQEGHSRGVYAVSFNTDGSLLASAGLDSIGRIWDLR
SGRTVMILDGHLDGHIKPIHALDWSSDGHRVLSGSADGWIKCWDVRKVQRTGGVGAHTSA
VSDMRWYKGLDDPLTGIPPGVDEKGAQLPKKSGTFFISSGFDRNVKVFSADDWTLVQTLS
GHTGPVASVDYSRDGKWIVSGGHDRTVKLWGRNDGEGI
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgatgcacccatcgcggcaggcgtatgtcgaggatgccgaacctcaaggcatcgcactt
gaagatattcccgatgaccacgactatgatatttccatgggaggaaccggtgttccatcg
gaaaaggcttccgcaatcctcaaccaattcaatcgcaagcgcttggcagcaacgatagca
gttcccaccgatgacacacgagtccgcgcgaagctccgggagatgggcgagcctgtcaca
ctcttcggagaggcgcttgttgaccgacgagatcgtttgcgcgagcttctcacgatccag
gccgagattacagggttagagaatggcgatatcgacatgggagacgccgacgacgatcag
gaggaagaccaggaggaagaattctactcgagaggcggacctgaacttcaacaagcgcga
ttgaagattgccgagtactctctaccacgagcgaagaagaggacgcaattccaaaaggcc
gagtccacgattccattacgcacccatgtcaagtttcgcaaacaggtcaaggagagatta
caagcattcgaacttcaaggtagtcagactgtcggtgagcgccatgtcagcatgacgcgt
atatcgcccaacggtgagctggtggccgtgggcaactggggcggccaagtcaagctggtc
gaaataccaagcttgaaccaaaagatgaacttccgcggtcataccaacaagatcagcggt
ttgtcctggttccctggtgccactcttcaggaaaacaatgtgtcgcccgattccgttaac
ctggcatcgggcggtgccgagggatctatccacatgtggtctctgaaccaagatactccc
ttggcaaccctcgaaggacactcgcagcgagtatgtcgtatcgagttccatccttccggt
cgccatctggcctctgcatctgaggatacatcatggcgcctctgggatgttgaaacaacc
acagaagtccttctgcaagaaggtcactcaagaggtgtctatgctgtcagcttcaatact
gatggctccctacttgccagcgcgggtctcgacagtattggcagaatctgggatctgaga
tctgggcgcacagttatgattttggacggacacctcgacggtcacatcaagcctatccat
gccctagactggagctccgatggacatagagtgctatctgggtcggctgatggctggatc
aagtgctgggacgttcgaaaggttcaaagaacaggtggtgttggtgcgcacaccagcgct
gtctctgatatgcgatggtacaagggtctcgatgacccccttactggtattccgcccggc
gtcgacgaaaagggcgcgcagctacccaagaagtccggcactttcttcatctcgagtggc
tttgacagaaacgtcaaggtattctcggccgatgactggacactggtgcaaacactcagt
ggccacacaggtccagttgccagtgtagactacagcagggacggcaagtggattgtcagt
ggaggccacgatcgcacagtcaaactctgggggcgaaacgatggcgagggaatctaa
DBGET
integrated database retrieval system