KEGG   Fusarium pseudograminearum: FPSE_02019
Entry
FPSE_02019        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_02019
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_02019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_02019
   03041 Spliceosome [BR:fpu03041]
    FPSE_02019
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FPSE_02019
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FPSE_02019
Spliceosome [BR:fpu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    FPSE_02019
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20360638
NCBI-ProteinID: XP_009253413
UniProt: K3W2K0
LinkDB
Position
1:complement(<1418641..>1419054)
AA seq 118 aa
MATLGGYLNSETPLLELYRPHQLANTHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAV
ERIIRTPDDSEPSAQVPLGLYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGGIKHV
NT seq 357 nt   +upstreamnt  +downstreamnt
atggctactctgggcggatatcttaacagtgagacacccctccttgagctctaccgacct
catcagcttgctaacacccaccaagaaaaggtcctgattgtcacagccgactctcgcatt
ctagtcggcacaatggcagcatgtgaccaaacaaccaacctggttttgaacaacgctgtg
gaacgaatcatccgaacgcccgacgactctgagccctcagctcaagtacccctgggactt
tacctcgtgcgcggtgacaacgtatgctcgattggcctcgtagatgaggcgcttgacgat
agtatcaactggacagaagtcaagggttcagcgattggcggtataaaacatgtatag

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