Fusarium pseudograminearum: FPSE_02019
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Entry
FPSE_02019 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_02019
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_02019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_02019
03041 Spliceosome [BR:
fpu03041
]
FPSE_02019
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPSE_02019
mRNA degradation factors
5'-3' decay
Lsm complex
FPSE_02019
Spliceosome [BR:
fpu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FPSE_02019
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20360638
NCBI-ProteinID:
XP_009253413
UniProt:
K3W2K0
LinkDB
All DBs
Position
1:complement(<1418641..>1419054)
Genome browser
AA seq
118 aa
AA seq
DB search
MATLGGYLNSETPLLELYRPHQLANTHQEKVLIVTADSRILVGTMAACDQTTNLVLNNAV
ERIIRTPDDSEPSAQVPLGLYLVRGDNVCSIGLVDEALDDSINWTEVKGSAIGGIKHV
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggctactctgggcggatatcttaacagtgagacacccctccttgagctctaccgacct
catcagcttgctaacacccaccaagaaaaggtcctgattgtcacagccgactctcgcatt
ctagtcggcacaatggcagcatgtgaccaaacaaccaacctggttttgaacaacgctgtg
gaacgaatcatccgaacgcccgacgactctgagccctcagctcaagtacccctgggactt
tacctcgtgcgcggtgacaacgtatgctcgattggcctcgtagatgaggcgcttgacgat
agtatcaactggacagaagtcaagggttcagcgattggcggtataaaacatgtatag
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