Fusarium pseudograminearum: FPSE_02037
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Entry
FPSE_02037 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_02037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_02037
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_02037
Spliceosome [BR:
fpu03041
]
Complex C
Other components
Step II factors
FPSE_02037
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
AAA_30
T2SSE
nSTAND3
AAA_7
Flavi_DEAD
SLFN-g3_helicase
Microtub_bd
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
20360656
NCBI-ProteinID:
XP_009253431
UniProt:
K3VUG4
LinkDB
All DBs
Position
1:complement(1373721..1376645)
Genome browser
AA seq
974 aa
AA seq
DB search
MTPDPKRRRIDSAARPYKRDHQDDFRAPTPRAQSRYAPTPPRDEVAPTDEVAPTDEDKAL
DRDWYGGDEFGGHSFGDDTHNPFASYGAWEGQQQEAARHEKMSIRFDARREQRNRDNDAW
ETNRMLQSGVAQRRDMASDFVDDDDSTRVHLLIHDLRPPFLKGRTIFTKQLEPVPAVKDP
QSHMAVFSRKGSKVVKEARQQRERQRQAKEATSMTGTTLGNIMGAKEDDGDSALPVPAED
DAQPERKGNKFSEHLKKTDGASNFSQSKTLREQREYLPAFAVREDLLRVIRENQVVICVG
ETGSGKTTQLTQFLQEDGYGKTGMIGCTQPRRVAAMSVAKRVAEEMEVKLGSTVGYAIRF
EDCTSKETVIKYMTDGVLLRESLNEPDLDRYSCVIMDEAHERALNTDILMGLFKKILQRR
RDLKLIVTSATMNSKRFSDFFGGAPEFIIPGRTFPVDVMFHRSPVEDYVDQAVHQVLSIH
VSMGPGDILVFMTGQEDIEITCELVQKRLDALNDPPKLSILPIYSQMPADLQAKIFDKAA
PGVRKCIVATNIAETSLTVDGIKYVVDAGYSKMKVYNPKIGMDTLQITPISQANASQRSG
RAGRTGPGKAFRLYSEKEFKEDLYLQTIPEIQRTNLANTVLMLKSLGVKDLLDFDFMDPP
PQDTITTSMFDLWALGALDNLGELTELGKKMSHFPMDPSLSKLLITAEEYGCSEEMITIV
SMLSVPNVFYRPKERQEEADAAREKFWVHESDHLTYLQVYTNWKANGYSDGWCVKHFLHP
KSLRRAKEIREQLLDIIRMQKMTLTSCGIDWDIVRKCICSGYYHQAAKYKGSGEYINLRT
NLGVQLHPTSALYAGHPPDYIVYHELILTSKVYVSTVTAVDPHWLADLGDVFYSLKEKGY
SARDKRIIETEFNRKMEIEAKMADDKRKDEERKQLEEERSQKKPTKAKIGADGKKFITQG
AVRKPVTKRRNRPF
NT seq
2925 nt
NT seq
+upstream
nt +downstream
nt
atgacgccagatcctaaaaggcgacggatcgactctgcagcacgcccatataaacgggat
catcaagatgatttccgcgcgccaaccccccgagcgcaatcacgctacgcgcctacgcct
cctcgtgacgaagtagcaccgaccgacgaagtagcaccgaccgacgaagacaaggctttg
gaccgcgactggtatggcggtgatgagttcggagggcatagctttggagacgatacccat
aatccattcgcatcctacggcgcctgggaaggccagcagcaggaagcagcccgacacgaa
aagatgtccatccgattcgatgcacggcgcgagcaaaggaatcgagacaatgacgcctgg
gagacaaaccgaatgttacaatctggagtggcgcaacgacgagatatggcttccgacttt
gttgacgatgacgattcaacccgagtccatcttttgattcatgacctccgacctcccttt
ctgaaaggacgaacgattttcacgaaacaactagagccagtgcccgctgttaaagacccc
caaagtcacatggcggttttcagtcgaaagggtagcaaagtggtcaaagaagctcgacaa
cagcgagaacgtcaaagacaagccaaggaagcgacgagcatgaccggaacgacgcttgga
aacattatgggcgcaaaagaggacgacggcgattccgcactgcccgtacctgccgaggac
gatgctcaacctgagcggaagggcaacaaattcagcgaacacttgaaaaagacggacggc
gccagcaacttcagccagagcaaaacactacgagagcagcgagaatacctgccggcgttt
gcagttcgtgaggaccttcttcgtgtgattagagagaatcaggttgtcatttgtgtgggt
gagacaggttccggcaaaacaacacagttgacgcagttcctccaagaagatggatacgga
aaaaccgggatgatcgggtgcacacagccgcgacgagttgcagcgatgagtgtggccaaa
cgtgtggccgaagaaatggaagtgaagcttggaagcacagtcggttatgccattcgattc
gaagactgcaccagcaaggagacggtcatcaaatacatgaccgatggtgttctattgcga
gagtcgctgaacgaaccagatctggatcgctactcctgtgtcatcatggacgaagcacac
gaacgtgcccttaatacagatatcctcatgggcctgttcaagaagattctgcaaaggcga
cgcgacttgaagctcatcgtaacatcggccacaatgaactcgaagcgtttctccgatttt
tttggcggcgctcctgaattcatcatccctggacgaactttcccagtcgacgttatgttc
catcgatcgcctgttgaggactacgtcgaccaggctgtgcatcaagtattgtctatccat
gtctcaatgggtcctggagatatcttggtgttcatgactggtcaagaagacattgaaatc
acatgtgagctggtgcaaaaacgactcgacgccctcaatgaccctcctaagttgagtatc
ctgcctatttatagtcagatgcctgcagatctacaggccaagattttcgataaggctgct
cctggtgttcgaaaatgcattgttgcaaccaacattgccgagaccagtttgacagttgac
ggtatcaagtacgtcgtggatgcaggctactccaagatgaaggtatacaaccccaaaatt
ggcatggatacgctccaaattacgcctatctcgcaagccaacgcttcacagcgctcaggt
cgagccggtcgaacaggcccaggaaaggcattcagactatactcggaaaaggagtttaag
gaagacctgtacctgcagacgattccggaaattcagcgcacaaatcttgccaacactgtt
ctgatgttgaaatctctcggtgtcaaggatctcctggactttgatttcatggacccccct
ccgcaggacactattacaacctcaatgtttgacctatgggcccttggagccttggacaat
ctgggcgagctcaccgagctaggaaagaagatgagtcacttcccaatggacccatcccta
tctaaactgctcattaccgcagaagagtacggttgcagtgaggagatgatcactatcgtc
tctatgctgtctgtgcccaacgtcttctaccgcccgaaggagcgacaagaagaagctgat
gctgcacgtgagaagttttgggtgcatgagtcggaccatttgacgtatcttcaagtttac
acaaactggaaggcaaacgggtattccgatggttggtgtgtaaagcacttcctgcacccc
aagtctttaaggcgagccaaggaaattcgtgagcagctgttggacatcattcgtatgcaa
aagatgacgctgacaagctgtggaattgactgggatatcgtgcgcaagtgcatttgttct
ggctactaccaccaagcagccaaatacaaaggctcgggcgagtacatcaacctgcgcacc
aacctgggtgtgcaattgcacccgacaagtgcactgtacgctgggcacccgcccgactat
attgtctaccacgaattgatcctcacctccaaggtatatgtgtcaacagtgacagctgta
gacccccactggctcgctgacctcggcgatgtgttctactcgctcaaggagaagggctat
tcagcccgtgacaagcgtatcatagaaacggaattcaaccggaagatggaaattgaggcc
aagatggctgatgataaacgcaaggatgaagaaaggaagcagctggaggaggagcggagc
caaaagaagccgacgaaggcgaagattggagcagatggcaagaaatttataacccaagga
gcagtcaggaagccggtgacgaagcgacgcaacagaccattttag
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integrated database retrieval system
