Fusarium pseudograminearum: FPSE_02648
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Entry
FPSE_02648 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12597
protein AIR1/2
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_02648
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_02648
03016 Transfer RNA biogenesis [BR:
fpu03016
]
FPSE_02648
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
FPSE_02648
Transfer RNA biogenesis [BR:
fpu03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
FPSE_02648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
20361267
NCBI-ProteinID:
XP_009254042
UniProt:
K3VSZ5
LinkDB
All DBs
Position
1:10126147..10127991
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AA seq
614 aa
AA seq
DB search
MATEDPGDVIYLSSGDEAEAEAQAAATKKRSLEDASDAKEASSAPEAKRLRKNGPVTRSS
ASKNLSDEDQKSSNGSLNTGDTSTGDSVPGGSDNIPDFKHLEWSFKLPDTSDNKSGSWLK
RFQVWVKAFVKTNSAISQGIDVHVAEAAYAWYIDHLKGIKPKKKKSAKQIAKEFESTGEL
DALLKNILPKGPGPNQPTLDTWVKKQPSKEPVRKGKRSRGSSVSEGEIDEDESESEAEYE
PTLSTAERKEEDVKEANGDSASKVLNHHQSLPIIETHRRVPTGNDALEQQRRYFPSASDP
AQMCLLCGLNTHLAPSCPTLVCSCGSLDHSIVCCPEKERCRKCRQVGHQTSGCTEKLALT
KEEGLACVFCNSTDHLEEQCTEVWRSFHPHVSVVRKVAFIPASCSMCGSDGHFSSDCKPQ
RNDMSNPTWSVKNRDQYVDPDCGMAAIEEATGGKPTGRSAVAPELRIRGHAARTTNVHYS
ESDDSEVEFLGNKRVEKPAVGQIRMASNIQMPNTQNGRPRRNPRQNGPAQPPLPPGPPPP
GPPSMRGLGSFSSLPRKPPPRDFRNVPPPSPPRGPQGQGRPYGNNAPPSFKPRGGGRGGR
GGRGGRGRGRGRGK
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcaactgaagaccccggagacgtcatctatctgtctagcggcgatgaagccgaggcc
gaagctcaggccgcagctacaaagaagaggtccctcgaagatgcatctgacgcaaaggaa
gcctcttcagcgcccgaagctaagcgcttgaggaagaatggacctgtcacgcgctcctcc
gcgagcaaaaacttgtcagatgaagatcagaaatcttcaaatggctcgttaaatactggt
gacacttccactggggactccgtacctggaggttcagacaacattcccgacttcaagcat
ttggaatggagcttcaagttacccgacacttccgacaacaagagtggctcctggctcaaa
agattccaggtctgggttaaagcatttgtgaaaacgaattcagccataagtcaaggtatc
gacgtgcatgtagctgaagctgcttacgcttggtacattgatcaccttaaaggaataaaa
ccgaagaagaaaaagagtgctaagcaaatcgcgaaagagtttgaaagcactggcgaactt
gatgctctcctcaaaaatatcctacccaaggggcctggacctaatcagccgaccttggac
acttgggtcaaaaagcaacctagcaaggaacccgttcgtaaaggcaaacgctctcgcggt
tctagtgtaagcgagggagagattgatgaagacgagtccgagagcgaagctgaatacgaa
ccaacactcagcacagctgaaaggaaagaagaagacgtcaaagaagccaatggtgactcg
gcatccaaagttttaaatcaccaccagagtttgccgataatcgagacgcacaggagagtt
cctaccggaaacgatgcattggagcaacagcgaagatacttcccatcagccagtgatcct
gcccagatgtgtcttctctgtggcttgaacacgcacttggcgccgagctgtccaacgctt
gtctgctcatgtggaagtctggaccactcgatcgtgtgctgccccgagaaggaaaggtgc
aggaaatgccgtcaagttggccaccaaacaagcggctgcactgagaagttggcattgacc
aaagaggaaggacttgcttgtgtgttttgcaattcaacggatcaccttgaagagcagtgc
acggaagtgtggcgatcgtttcacccacatgtgtctgtggtcagaaaggtcgcgtttatt
cctgcatcgtgttctatgtgtggaagtgatgggcacttttcctcggattgcaagcctcaa
cgcaatgatatgtctaaccccacctggtctgtgaagaaccgtgaccaatatgttgacccc
gattgtggtatggccgcgatcgaggaggcgacaggaggaaagccaaccggcagatccgca
gtggcccctgagcttaggatccgcggccacgctgcgcgaacgacaaacgtacactactct
gagagtgacgactcggaggtcgaattcttagggaataaacgcgttgagaaaccggctgtc
ggacagattcgaatggccagcaacattcagatgccaaacacgcaaaacggcaggccgcga
aggaaccctagacagaacggaccagcccaacctcccctccctcctggaccccctcctcct
gggccaccatctatgcgagggttaggttcattctcgtcactcccacgaaagcctcctccg
cgagacttcagaaatgttcccccaccatctccccctcgaggcccgcagggacaggggagg
ccgtacggcaataacgcacctccatcttttaagccaagagggggtgggcgtggcggacga
ggaggacgaggaggtcgtggacgtggaaggggcaggggcaaatag
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