KEGG   Fusarium pseudograminearum: FPSE_02939
Entry
FPSE_02939        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12601  superkiller protein 8
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_02939
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_02939
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     FPSE_02939
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40_WDHD1_1st WD40 Beta-prop_EML_2 WD40_Prp19 WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_TEP1_2nd Beta-prop_Vps41 EIF3I Beta-prop_RIG_2nd Ribosomal_L32p Beta-prop_WDR19_1st Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_EML Beta-prop_DCAF12 WD40_MABP1-WDR62_1st eIF2A WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_Nup120_160 Beta-prop_SCAP Beta-prop_WDR35_TULP_N WD40_RFWD3 Beta-prop_WDR75_2nd Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like Beta-prop_RIG_1st WDR54 MIOS_WD40 Beta-prop_TEP1_C PALB2_WD40 Beta-prop_IFT122_2nd DUF4987
Other DBs
NCBI-GeneID: 20361558
NCBI-ProteinID: XP_009254333
UniProt: K3VRZ7
LinkDB
Position
3:complement(4133028..4135057)
AA seq 408 aa
MAAALLPRLSSTPLISAISFRQFTQKLFPTLSIAIPGVSLNLPTIDDIWESVLRAVPKNK
VSHSRKRHRQMAGKALKDQNGLCNCPGCGQPKRTHRLCQHCLEAHITDIFSIATTPKAVI
SGSGSSTLHIHDTTDPSFPLKQSISDAHKLGCHHVCASRNGNVAASAGFGGEVKTWKVDN
DTGEWSLSGEIAGASTKPGEAWALALSEDGSYLATTTNDGRINVWDIVDEKKPKIREYET
GSAGSGSFGMSVDLSRDGKFTASGHQNGSVYIFNNDTGRVLYSLSGLAKPVRSVAFSPGN
TRLAAAGDAGIIAIYDMKHGEHIGNLTGHSSWITSLDWSDTGEYLLSGSMDGKVKVWSIE
RTTCVATHSETDKALWSVKWLPKTVRSEMFCTAGANRSLSFYREATGG
NT seq 1227 nt   +upstreamnt  +downstreamnt
atggccgctgcactcctcccccgactctcttctacgcccttgatctcggcgatctctttc
cgacaattcacccagaagctcttcccgacattgtcgattgcgatccccggtgtctcgtta
aatctccccaccattgatgatatctgggaatccgtgctacgagctgtgcccaagaacaag
gtctctcactcaaggaagcgacacaggcaaatggcgggcaaggcgctcaaggaccaaaac
ggcctgtgcaactgtcctggatgtggccagcccaagcgtacacaccggttatgccaacat
tgtcttgaagcccacatcaccgacatcttctctattgcgaccacgcccaaagctgtgata
tcaggcagcggctcttccacactacacattcatgacaccactgatccttcattcccgctc
aagcaatccatttcagatgctcacaagctcggatgccaccacgtgtgcgcttcacggaac
ggcaatgttgcagctagtgccggcttcggaggcgaagtgaagacttggaaggtcgacaat
gacactggtgaatggagtcttagtggtgagattgcaggggcttcgacgaagcctggcgag
gcctgggcattggcgctgagcgaagacggctcctaccttgctaccacaaccaatgacgga
cgaatcaatgtatgggatatcgttgatgagaagaagcccaagatccgagagtacgagact
ggaagcgctgggtcaggcagctttggcatgtctgtggacttgagccgagatggcaaattc
actgccagcggacatcagaacggatctgtctacatcttcaacaacgacacaggacgagtc
ttgtattcactctctggtctcgcgaagcctgtgcgatcagttgccttttctccaggcaac
acccgacttgcggcagcaggagatgctggcatcatcgctatttacgacatgaagcatgga
gagcatattggaaacctgaccggtcactcttcatggatcacgtcccttgactggagcgac
actggagaataccttttgagtggatctatggatggaaaggtcaaggtctggtcaattgag
cgcactacatgcgttgcgacacacagcgagacggacaaggctctctggtctgtgaaatgg
ctgccaaagactgtcagaagtgaaatgttttgcaccgctggtgcaaacagaagcctctcc
ttctaccgggaggccactggaggttga

DBGET integrated database retrieval system