Fusarium pseudograminearum: FPSE_02939
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Entry
FPSE_02939 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12601
superkiller protein 8
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_02939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_02939
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
FPSE_02939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WDR55
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_TEP1_2nd
Beta-prop_Vps41
EIF3I
Beta-prop_RIG_2nd
Ribosomal_L32p
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_EML
Beta-prop_DCAF12
WD40_MABP1-WDR62_1st
eIF2A
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_Nup120_160
Beta-prop_SCAP
Beta-prop_WDR35_TULP_N
WD40_RFWD3
Beta-prop_WDR75_2nd
Beta-prop_NUP159_NUP214
Cytochrom_D1
WD40_like
Beta-prop_RIG_1st
WDR54
MIOS_WD40
Beta-prop_TEP1_C
PALB2_WD40
Beta-prop_IFT122_2nd
DUF4987
Motif
Other DBs
NCBI-GeneID:
20361558
NCBI-ProteinID:
XP_009254333
UniProt:
K3VRZ7
LinkDB
All DBs
Position
3:complement(4133028..4135057)
Genome browser
AA seq
408 aa
AA seq
DB search
MAAALLPRLSSTPLISAISFRQFTQKLFPTLSIAIPGVSLNLPTIDDIWESVLRAVPKNK
VSHSRKRHRQMAGKALKDQNGLCNCPGCGQPKRTHRLCQHCLEAHITDIFSIATTPKAVI
SGSGSSTLHIHDTTDPSFPLKQSISDAHKLGCHHVCASRNGNVAASAGFGGEVKTWKVDN
DTGEWSLSGEIAGASTKPGEAWALALSEDGSYLATTTNDGRINVWDIVDEKKPKIREYET
GSAGSGSFGMSVDLSRDGKFTASGHQNGSVYIFNNDTGRVLYSLSGLAKPVRSVAFSPGN
TRLAAAGDAGIIAIYDMKHGEHIGNLTGHSSWITSLDWSDTGEYLLSGSMDGKVKVWSIE
RTTCVATHSETDKALWSVKWLPKTVRSEMFCTAGANRSLSFYREATGG
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgcactcctcccccgactctcttctacgcccttgatctcggcgatctctttc
cgacaattcacccagaagctcttcccgacattgtcgattgcgatccccggtgtctcgtta
aatctccccaccattgatgatatctgggaatccgtgctacgagctgtgcccaagaacaag
gtctctcactcaaggaagcgacacaggcaaatggcgggcaaggcgctcaaggaccaaaac
ggcctgtgcaactgtcctggatgtggccagcccaagcgtacacaccggttatgccaacat
tgtcttgaagcccacatcaccgacatcttctctattgcgaccacgcccaaagctgtgata
tcaggcagcggctcttccacactacacattcatgacaccactgatccttcattcccgctc
aagcaatccatttcagatgctcacaagctcggatgccaccacgtgtgcgcttcacggaac
ggcaatgttgcagctagtgccggcttcggaggcgaagtgaagacttggaaggtcgacaat
gacactggtgaatggagtcttagtggtgagattgcaggggcttcgacgaagcctggcgag
gcctgggcattggcgctgagcgaagacggctcctaccttgctaccacaaccaatgacgga
cgaatcaatgtatgggatatcgttgatgagaagaagcccaagatccgagagtacgagact
ggaagcgctgggtcaggcagctttggcatgtctgtggacttgagccgagatggcaaattc
actgccagcggacatcagaacggatctgtctacatcttcaacaacgacacaggacgagtc
ttgtattcactctctggtctcgcgaagcctgtgcgatcagttgccttttctccaggcaac
acccgacttgcggcagcaggagatgctggcatcatcgctatttacgacatgaagcatgga
gagcatattggaaacctgaccggtcactcttcatggatcacgtcccttgactggagcgac
actggagaataccttttgagtggatctatggatggaaaggtcaaggtctggtcaattgag
cgcactacatgcgttgcgacacacagcgagacggacaaggctctctggtctgtgaaatgg
ctgccaaagactgtcagaagtgaaatgttttgcaccgctggtgcaaacagaagcctctcc
ttctaccgggaggccactggaggttga
DBGET
integrated database retrieval system