Fusarium pseudograminearum: FPSE_03493
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Entry
FPSE_03493 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K03678
exosome complex component RRP45
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_03493
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_03493
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FPSE_03493
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20362112
NCBI-ProteinID:
XP_009254887
UniProt:
K3VQR0
LinkDB
All DBs
Position
3:2499147..2500080
Genome browser
AA seq
293 aa
AA seq
DB search
MPREAEPSLSEKTFIAQALNEGLRLDGRKFDEFRPLEITFGDEYGVAEVKYGKTRVLAKV
SAEVTVPYTDRPFDGVFTITSELSPMVAPSYEVNRPSLEEVLLSRLLEKTIRRSGALDTE
SLCLIAGKKCWSIRVDLHVLAHDGNLTDAACVAVIAALRHFRKPDSSIEGETLTIYTSAE
REPVPLSWLHSPFCVTYSFYGEDGSQVLVDTNWLEEKMRISHCTYSLNKHGEISQISKLG
GKALDAPLFIQCAQGALNRSKDLSNLVDNKLAEDAKRRDKGGLMAELTAENDR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgtgaagccgagccttctctctctgagaagacattcattgctcaggccctgaac
gagggtttacggttagatggtcgcaaattcgacgaattccgacctcttgagatcactttt
ggagatgagtatggagtggcagaggtgaaatatggaaaaacaagggtactagccaaggtc
tcagccgaggtgactgtgccatacacagaccgtccctttgacggagttttcacaatcaca
tcagaactcagccccatggtcgctccttcatatgaggtcaaccgcccttcactcgaggag
gttcttctctcgaggcttcttgagaagacaattaggagatcgggtgccctggataccgaa
tcactatgtctcatcgccggcaaaaagtgctggtctatccgagttgatcttcatgtcctt
gcccacgatggcaaccttacagatgctgcctgcgtagccgttattgcagcccttcgacat
ttccgcaagcctgattcaagcatcgaaggagaaaccctcactatctacacatccgccgag
agagagcctgtgcctctgagctggctccattctccattctgcgtcacgtacagtttctat
ggcgaggacggaagccaagttcttgtcgacaccaactggcttgaggagaaaatgcgcatt
tcccactgcacatacagtctcaacaagcacggtgagatcagccagatctccaaactagga
ggaaaggccctggatgcgccgttgttcatccagtgcgctcagggtgcgctcaaccgatcc
aaggatctctctaaccttgtggataacaagcttgccgaggacgcaaagcgaagggacaag
ggagggctcatggcagagttgacggccgagaacgataggtga
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