Fusarium pseudograminearum: FPSE_03630
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Entry
FPSE_03630 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12855
pre-mRNA-processing factor 6
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_03630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_03630
Spliceosome [BR:
fpu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
FPSE_03630
Complex C
U5 SnRNP specific factors
FPSE_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP1_N
TPR_14
TPR_19
HAT_PRP39_N
TPR_16
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_C
TPR_CcmH_CycH
TPR_2
TPR_8
TPR_9
ARM_TT21_2nd
TPR_11
NatA_aux_su
TPR_15
TPR_21
ARM_TT21_5th
GILT
Motif
Other DBs
NCBI-GeneID:
20362249
NCBI-ProteinID:
XP_009255024
UniProt:
K3W1M4
LinkDB
All DBs
Position
1:complement(10404337..10407132)
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AA seq
931 aa
AA seq
DB search
MSGRRDFLNQAAPENYVAGLGRGATGFTTRSDLGPARDGPSEDQIKEALAKRAAQLGLAP
DKKGKDKEEDEGNNDEERYQDPDNEVGLFAGGVYDKDDEEADKIWEWVDERMDRRKKQRE
AREQAEQDEYERNNPKIQQQFSDLKRALATVTDDEWANLPEVGDLTGKNRRSKKALRERM
YAVPDSALAAARDAGQMGTTVMDEDMAPSASGGDAADGTMTNFAKIGAARDKVLKSRLEQ
AGSDSVAPGTSTSIDPQGYLTSLDKNKTAMGNPEDNVGDVNRVRELLQSVVKTNPSNALG
WIAAARLEELAGKTVTARKTIDKGCAQCPKSEDAWLENIRLNEGSPNAKIIARRAIEANN
SSVRLWVEAMRLEVIPSNKKRVIRQALDHIPESEALWKEAVNLEESVDDAKLLLAKATEL
IPLSIDLWLALARLETPENAQKVLNRARKACPTSHEIWIAAARLQEQLGQGTKVNVIKRG
VQVLAKESAMPKREEWIAEAERCEDEGAVITCQNIIRETLGWSLDEDDDRKDIWMEDARS
SINRGKYETAKAIYAYALRVFVNSRTMWMAAADLERNHGTRDSLWQVLEKAVDACPKSED
LWMMLAKEKWRAGELDGARLVLKRAFNQNPNNEDIWLSAVKLESESGNEEQARKLLEIAR
EQAPTDRVWMKSVVYERVLGNVEAALDLVLQALQLFPASPKLWMLKGQIYEDLGKIGPAR
EAYATGVKAVPKSVPLWLLYAKLEEETGLTVKARSVLDRARLAVPNNALLWRESVRLERR
AGNMAQAKAMMARAHREVPKSDVLWAEQVWHLEARTQRKARILEAIKTVDGSPVIFVVAA
RIFWGDRKLEQAQKWFEKAIVRDSDYGDAWAWYYKFLCQHGTEEKQADVVTKCVLNEPRH
GDMWPAVAKKPANAGKSCEEILKLVAEELEQ
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgtccgggcgacgcgactttctcaaccaggcagcgcccgagaactacgtcgctggtctt
ggtcgtggcgcgacaggttttacgacaagatccgatcttggtcccgctagagacggcccc
agtgaggatcagattaaggaagcgctcgcgaaacgagctgctcaacttggtcttgcgcca
gacaagaagggcaaagacaaggaggaagatgaaggaaacaacgatgaagaacgataccaa
gatcccgataacgaggtcggactctttgccggcggcgtctacgacaaggacgatgaggaa
gccgacaagatttgggaatgggtagatgagagaatggaccgaagaaaaaagcagcgagaa
gcgcgcgagcaggccgagcaggacgaatacgaacgaaacaaccccaagattcagcagcag
ttctccgacttgaagcgagcacttgccactgttacggacgacgaatgggcaaacctgcca
gaagtcggagatttgacaggaaagaaccggcgtagcaagaaggcactgcgggagaggatg
tatgctgtccctgacagcgctcttgcggcagcgcgcgatgcgggccagatgggaacaact
gttatggacgaggacatggcaccgagtgccagcggcggcgatgcagcagacggcaccatg
accaactttgccaagatcggagcggctcgcgacaaggtgctcaagtccagactggagcag
gctggtagcgattcagttgctccaggcacctcgaccagtatcgatccacaaggctatctg
acgagcctcgataaaaataaaacagctatgggcaatccagaagacaatgttggagatgtc
aaccgtgtgcgcgaactcttgcagtcagttgtcaagacaaacccttcaaatgctttgggt
tggatcgcagcggcacgtcttgaggagttggcaggcaagactgtgacagcacgaaagacc
attgacaaaggttgtgcacagtgcccaaaaagcgaagacgcatggctggagaacattcga
ctcaacgagggctcacccaatgccaagatcatcgcgcgaagagctattgaggccaacaac
agctcagtcagactatgggtagaggccatgagactggaggtgatcccaagcaacaagaag
cgagttattcgacaggcacttgatcatattccggaatcggaagctctgtggaaggaggct
gtaaatctggaggagagcgtcgatgatgccaagcttctcttggccaaggcgacagaactt
attcccctttctattgatctttggctggcattggcccgtctcgagacacccgagaacgcc
caaaaggtcctcaacagggcacgaaaggcttgtcctacttctcacgagatttggattgca
gctgcacgtctacaggagcagcttggacaaggaaccaaggtcaacgttatcaagcgtggt
gtccaggttctggccaaggaatctgccatgcccaagcgtgaagaatggattgccgaggct
gaacgctgcgaagatgaaggcgctgtcatcacttgccagaacattatccgcgaaactctg
ggttggagtttggacgaggacgacgatcgcaaggacatatggatggaggatgcgaggtct
agtatcaaccgaggcaaatatgagacagcaaaggcaatctacgcctacgccctccgagtc
ttcgtcaacagcaggacgatgtggatggcagcagcagacctagagaggaaccatggtacc
cgagactctctctggcaggtattggagaaggccgtggatgcatgccccaagagtgaggat
ctgtggatgatgctggccaaggagaagtggagggctggagagctggacggcgctcgtctc
gtcctcaagcgagccttcaatcaaaaccccaacaacgaagatatttggctctctgctgtc
aagcttgagtccgaaagcggtaacgaggagcaggcgcgcaagcttttggagattgctcgt
gagcaagcccccacagatcgtgtatggatgaagagtgttgtatatgagcgagtgctgggc
aatgtcgaggcagcgcttgaccttgttctccaggcactccagttgttccctgcatcaccg
aagctctggatgctcaagggccagatctacgaggatctaggcaagattggcccggcgaga
gaggcctacgctactggtgtcaaggctgtaccaaagtctgtacccctgtggcttctgtat
gccaagctggaggaggaaaccggtctcaccgtcaaggctcgatctgtgcttgaccgtgct
cgactggcggtaccaaataatgcgctgttgtggcgtgagtcagtgcgacttgaacgacga
gctggcaacatggctcaggccaaggcgatgatggccagagcgcaccgagaagttcccaaa
agtgatgttctctgggcagaacaggtctggcatctggaagcacgcacacaacgcaaggct
cgtattctcgaggctatcaagactgtggacggcagccccgtcatctttgttgttgcggcg
cgcattttctggggcgatcgcaaactagagcaggcgcagaaatggttcgaaaaggccatt
gtgcgcgatagcgactacggagacgcatgggcttggtactacaagttcttatgccagcac
ggcacagaggagaagcaagctgatgttgtgaccaagtgcgttctcaatgagcctcgacat
ggcgacatgtggccagcagtcgccaagaagcctgcgaatgctgggaagagctgtgaagag
attctgaagctggttgctgaagagttggaacaatag
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