KEGG   Fusarium pseudograminearum: FPSE_03857
Entry
FPSE_03857        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K03679  exosome complex component RRP4
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_03857
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_03857
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FPSE_03857
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     FPSE_03857
SSDB
Motif
Pfam: RRP4_S1 ECR1_N KH_6 RRP40_S1 ECR1_N_2
Other DBs
NCBI-GeneID: 20362475
NCBI-ProteinID: XP_009255250
UniProt: K3VMI5
LinkDB
Position
1:complement(9447816..9448872)
AA seq 331 aa
MPITILSPQPPTPRRPQAVAAANNDSDSDSEGGAGVDADEIFTPGTVITSNSQWMRGHGT
YIPADSSEITSSLAGTLTKTNKLLSVRPLRARYTPEIGDLVVGRIVEVQAKRWRVDVAAS
QLAILQISAINLPGGILRKRTETDELQIRSFFAEGDLVVAEVQQLHQDGAASLHTRSLKY
GKLRNGVFAAVTGTGGGGGVVRSKRQVWTMDVANAGGKVDVLLGVNGYIWISKHIESETA
AEAAGINRMEETVSSKVYSSQNDPMDVATMREIARIRSVILALVENGLKVDEDTVTRGYG
EAVDQARDSTDDGLYLGGEKGRRLATAVAGH
NT seq 996 nt   +upstreamnt  +downstreamnt
atgcccatcacaattctcagtcctcagcctcctacacctaggagaccgcaagcagtcgct
gctgcaaacaatgactccgactccgactctgaaggtggcgctggcgtagatgccgatgaa
attttcacaccgggtaccgtaattacatctaactctcaatggatgcgtggacacggcaca
tatattcctgccgactcatctgaaatcacatcgtctcttgctggtactctcacaaagaca
aacaagctcctctcggtgcgccctcttcgcgctcgctacaccccagagatcggtgacctt
gtcgtcggtcgcatcgtcgaagtgcaggccaagcgatggcgcgttgatgtagctgcatcc
cagcttgctatcctccagatctcagccatcaacttgcctggtggaattctccgtaagcgt
accgagaccgatgagctgcagatccgcagcttcttcgccgaaggtgacctagtcgtcgca
gaggttcagcaactgcatcaggacggtgccgcgagtcttcacacccgaagtttgaagtac
ggcaagcttcgaaacggtgtatttgccgctgttactggtaccggtggcggcggcggtgtt
gtccgctccaaaaggcaggtctggacaatggacgttgccaacgccggcggcaaggtggat
gttcttctaggagttaatggttacatctggatcagcaagcacatcgagagcgagacggcc
gctgaggctgctggtatcaaccgcatggaggagactgtcagtagcaaggtctactcaagc
cagaacgaccccatggacgtagcaactatgcgtgagattgcgagaattcgcagtgtcatt
ttggctctggttgagaacgggctgaaggtggacgaggatacagtgaccagagggtacggc
gaagctgtggatcaggcaagagattcgactgacgatggtctgtacctgggaggcgagaag
ggacgacgtctagcaactgctgtggctggtcactga

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