Fusarium pseudograminearum: FPSE_04347
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Entry
FPSE_04347 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14548
U3 small nucleolar RNA-associated protein 4
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FPSE_04347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_04347
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FPSE_04347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
WD40_CDC20-Fz
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_2nd
WD40_Prp19
Beta-prop_EML
WD40
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
PQQ_2
Beta-prop_RSE1_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
20362965
NCBI-ProteinID:
XP_009255740
UniProt:
K3VNW4
LinkDB
All DBs
Position
1:<772289..>774953
Genome browser
AA seq
870 aa
AA seq
DB search
MDIHRCRFVPYKPSAINAIAFSHPKTRSAQQGNLARLAIGRANGDIEIWNPQNGSWNQEL
IMPGGKDRSVDGLVWVNEPDQDLGGGRVVVGKSRLFSIGYTSTVTEWDLETGRPKRHASG
QHGDIWCMAAQPSGTDKVGLGVESQDSTKLVAGTIDGELVMYSIEDDDLRFQRVLLRSPT
KKAQMVSITFQSRRVAIVGCSDSTIRAYDVTKGHMLRRMTLGADLGGGAKDIIVWSVKCL
PNGNIVSGDSTGQVCLWDGKTYTQAQRIQSHKQDVLSLAISADGTSILSGGMDRRTILYK
QNSGAGARWSKVWGRRYHDHDVKCMASFESGKISVVVSGGPDANPVVIPMKEMGRENHRI
MSSLPQQAPLLSAPKARFVVSWWDREVHIWLLRKSATEMIKTENIDINQNRKLIKTIVVK
GDSNITSATIDDEGSLLIVATAIDVKAFRLEHQDPVKPSDVKIFSSELPSKLAGVGATKV
QLSPNAQWLCAIQEGSRVVMGALDPVTPRPSLVFSPNVQRLTRLRRQIPRHILNGGLGSY
DRTITQVAFSPDSKMLAMSDIAGYIDTWILSDGEKIKSEDDASSSGESDSSDEEEEISQN
IEKWIRNPGAKLLPKLHSAATVLSFSADVPRAKVSPRSSIDGIDGAADHVDDYTLLTITS
SWSLRTFHPLQGSLTPWSRRNVRNDMPAPVQDLLDHAKGVFWEGSRAWIYGVSFLLMLDL
AQDLPKSAESDSNDKQTLKRKRTGPSTGAGGKMEQGAIAPSLVRKHTAGQWEDVDMEDAP
QPEDDISDDEADQADGELAQLRNREVGKDVELAETGGERKSWWMTYKYRPIFGVVPISTA
DQPLEVALVERPTWDVDMPESYFAVEQWRK
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggatatccatcgttgtcgattcgttccctacaagccctccgccatcaacgccatcgcc
ttctctcaccccaagacacgctcagcgcagcaaggcaacctcgcgcgacttgcgatcgga
cgagctaatggcgatatcgaaatctggaaccctcagaatggctcctggaaccaagaactc
atcatgcctggcggcaaagatcgaagcgtcgatgggttggtctgggtcaacgagcccgac
caagacctcggcggtggacgcgtcgtcgtcggaaagtcacgactcttcagcataggttat
acttctacagttacggaatgggatctcgagacaggacgacccaagaggcacgccagcggc
caacacggagacatctggtgcatggctgctcagcctagtggaaccgacaaggttggactc
ggtgtcgaatctcaagactctaccaagcttgttgccggaacaatcgatggtgagcttgtc
atgtactctattgaggatgatgacctgcgattccagcgagttttgttgcgatcgccaacc
aagaaggctcagatggtcagcatcaccttccagtcgcgcagagtcgccattgtcggctgc
tccgatagcacaattcgagcgtacgatgttacaaagggccacatgttgcgcaggatgaca
ctgggcgcggacctaggcggcggtgctaaggacatcatcgtctggtctgtcaagtgtcta
cccaacggcaacatcgtctcaggcgattctactggccaagtttgcctctgggatggcaag
acatacacccaagcacagcgaattcaaagccacaagcaggatgttctcagtctcgcaata
agcgccgacgggacttccatccttagcggtggcatggatcgacgaacgattctttacaag
cagaacagcggcgctggagctcgatggagcaaagtctggggacgaagataccacgaccac
gatgttaagtgcatggcatccttcgagagtggcaaaatcagcgtcgttgtctcaggaggt
cctgatgccaaccccgttgtcatccccatgaaggaaatgggtcgcgagaatcaccgtatc
atgtccagtctgccacagcaggctcctttgttgagcgcgccaaaggcccgcttcgttgtc
agctggtgggatagggaggttcacatctggcttcttcgaaagtcagccaccgaaatgatc
aagaccgaaaacatcgatatcaaccaaaaccgcaagctgattaagactattgtcgttaag
ggcgactcgaatattacatcggcaactatcgacgacgagggttcacttctgattgttgct
actgctatcgacgtcaaggccttcagactagaacaccaggatcccgtcaagccctctgat
gtcaaaattttctcttccgagcttccttcaaagcttgccggagttggtgccaccaaggtg
cagttgtcgcctaacgcgcaatggctctgcgcaatccaagaaggctctcgagttgtcatg
ggtgccctcgaccctgttactcctagaccttcactcgtcttctcaccaaatgtccaacga
ctaacacgcctacgacgacaaatcccacgtcatatcctcaacggaggattgggtagttac
gataggaccattacgcaggtcgctttctcgcctgactccaagatgctcgcgatgtctgac
attgccggctatatcgacacctggatcttgagcgacggcgaaaagatcaagtcagaggat
gacgcgtcctcatcgggtgagagtgactcttcggatgaggaagaagagatttcgcagaac
attgagaagtggatccgtaaccccggtgcgaagctactgcccaagctacactctgccgct
acggttctgtcattctcggctgatgttcctcgagccaaggtctcccctagaagctctatt
gacggaattgatggcgcagctgaccatgtcgatgactacaccctcctcaccatcacctca
tcgtggagcctacgtaccttccaccctctgcaaggctcactgaccccttggtcacgtcgc
aatgtccgaaacgatatgcccgctcctgtgcaggatcttctcgatcacgcaaagggtgtt
ttctgggagggctcccgcgcttggatctatggtgtatcattcctccttatgcttgaccta
gctcaagatctccctaaatctgccgagagcgacagcaacgacaagcaaacgctcaagcgc
aagaggacaggcccctctaccggagctggtggtaagatggagcaaggtgctattgcaccc
tctctggtccgcaagcacacggccggtcagtgggaggacgttgatatggaagacgctccc
caacctgaggatgacatcagtgacgatgaggctgaccaggccgatggtgaactcgctcag
ctacggaaccgtgaagtgggcaaagacgtcgaactcgccgagactggcggtgaacgcaag
agctggtggatgacctacaagtacagacccatctttggtgttgttcctatcagcaccgca
gaccagcctctcgaggttgccctggtggagaggccgacatgggatgtggacatgcccgag
agctactttgccgtcgagcagtggaggaagtaa
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