Fusarium pseudograminearum: FPSE_04805
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Entry
FPSE_04805 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_04805
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_04805
03041 Spliceosome [BR:
fpu03041
]
FPSE_04805
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
FPSE_04805
Spliceosome [BR:
fpu03041
]
Complex B
Other components
Prp19-related factors
FPSE_04805
Complex C
FPSE_04805
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
Mad3_BUB1_I
TPR_8
TPR_15
RPN7
ARM_TT21
AFF4_CHD
Motif
Other DBs
NCBI-GeneID:
20363423
NCBI-ProteinID:
XP_009256198
UniProt:
K3W0Z0
LinkDB
All DBs
Position
2:complement(7488981..7491573)
Genome browser
AA seq
822 aa
AA seq
DB search
MAPIVPALSWARRQPQLHLVSNEDSVYEQDILRDPGSVKPWLTYIEFKTRHGSILEQAYV
MERACTQLPRSYKLWKLYLSFRVKHVTKLNSALFDKEYRKVNALFEKALNLLHKMPRIWE
MYLRFLTKQPLVTLTRHVFDRALRALPITQHNRIWAIYRPFANSAAGVTAVKIWRRYMQV
HPEDAEDFIELLAQNGLYTEAALKFIEVLNNTRFNSKHGKGHYELWSEMVDLLVAHAADI
ETGHETGIDAERIIRSGISRFADQRGKLWSGLATYWIRRGSFERARDVFEEGITTVMTVR
DFTLIFEAYTEFEESIIGALMEVASGRAEKGVEDENADFELDIRMMRFEQLMDRRPFLLN
DVLLRQNPNNVPEWEKRVALWGDNKKEVAQTYTDAIAAIQPKRAVGAFHQLWTNYAKFYE
RGGDLRNARVIMEKAIKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRS
TVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLDETKKVYERIFELRIATPQTVVNYA
NLLEEHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAADRKIGIERLRDLFEQAVEDC
PPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLTS
TRPIYERAIAALPDVEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPDFWTKW
EQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRQPEGAEDAEITDAMAA
LERQSRAPQGFVAASTGPVGGNTATAAIPSNPDAIEIDGVDE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggccccaatcgttccggccctgagctgggcgcgcaggcagcctcagctgcatctcgtg
tccaatgaagactctgtttacgagcaagacatccttcgcgaccccggtagtgtcaagccg
tggctgacttacatcgaattcaaaacccggcacggttcgatactcgagcaagcatatgtg
atggagcgggcatgcacccagttacctcgatcatacaagttatggaagttgtatctatca
tttcgagttaagcacgtcaccaagctgaactcagcgttgttcgataaagaataccgcaaa
gtcaacgctctttttgaaaaggctctcaacttgctccacaagatgccacgaatttgggag
atgtatcttcggttcttgacaaagcagccactcgttaccctaacacgacatgtattcgac
cgagccttgcgagctctcccaataacacagcacaaccgaatatgggccatctataggcct
tttgcgaactctgctgctggagtaactgccgtaaaaatctggcgacgctacatgcaggtg
catccggaagatgccgaagactttattgagcttcttgcacaaaatggtctatataccgag
gcagcgctaaagtttatcgaagtcctcaacaataccaggttcaacagcaagcacggtaag
ggccactacgaactctggagtgagatggttgatctgctcgtcgcgcatgcagccgacatc
gaaactggacatgaaacaggaatcgacgctgagcggattattcgaagtggcatctcccgg
tttgctgaccagcgagggaagctctggtctggtctcgccacttactggatccgaaggggg
agctttgaacgggcgcgtgatgtgtttgaggagggcatcactacagtcatgacagttcga
gacttcactttgatcttcgaggcatacactgaattcgaggaatccattattggtgccctg
atggaagttgcatctggacgggctgaaaagggggttgaagatgagaacgcagatttcgag
ttggatatccgaatgatgcgtttcgaacagctaatggataggcgtccattcctcttaaac
gacgttcttttacgccaaaaccccaacaatgtgcctgaatgggagaagcgtgtagctctc
tggggcgataacaagaaagaggttgctcagacatacacagacgccattgcagccattcag
ccaaagcgagccgtgggtgctttccaccaactctggactaattatgccaagttctatgaa
cgtggaggtgatttgaggaacgctcgggtcatcatggaaaaggctatcaaagtccctttc
aaatcagtggcagaactcgccgacatgtggattgaatgggcggaaatggagctgcggaac
gagaacttcgatgatgctgtccgaatcatggcaaaagcagttcaagcgcccaagagatcc
accgttgactatttcgatgagactctatcaccacaacagcgagttcacaaaagctggaaa
ctctggagtttctacgtcgaccttgtcgaaagtgtttcaactctggatgaaactaagaag
gtttacgagcggatatttgagctccgaatcgcgacacctcaaacagttgttaactacgca
aacttgctcgaggagcataaatactatgaagagtcgttcaagatctatgagcgcggcttg
gacctctttagttatcctgtcgcctttgagctttggaacctctatcttaccaaagctgcc
gatcgcaagattggaatcgaacgacttcgagatctcttcgagcaagccgtggaggattgt
cctccgaaattcgcaaagacaatttacctcatgtacggcaatctggaagaggagcgtggc
ttggcgcgacatgccatgcgcatctacgagcgggccacaagggccgttgcagatgaagat
cgagccgatatgtttaacttttatatcaccaaatctgcttccaactttggcttgacatcg
acccggccaatctacgagagagccatcgctgctcttcccgacgtcgaagcaaaggatatg
tgccttaagtttgcagacatggagaagcggttgggcgagattgatagggctcgcgctatc
tatggccacgcgtcgcagttctgcgatcctcgaactagtcctgacttctggacgaagtgg
gagcagttcgaagtacagcatggtaacgaagacactttcaaggaaatgctgcgcattaaa
cgaagtgtacaagcgcagtacaacaccgacgtcaactttattgcctcccaggctctggca
cgcagccagcgtcaacctgagggcgccgaggacgctgagattacagatgccatggcagca
ttggaaaggcagtcaagagcaccacagggatttgtcgcggccagtacgggcccagtagga
ggaaacacagcgacagccgccattccatccaatcccgacgctattgagattgatggcgtt
gatgaatga
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