KEGG   Fusarium pseudograminearum: FPSE_04805
Entry
FPSE_04805        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_04805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_04805
   03041 Spliceosome [BR:fpu03041]
    FPSE_04805
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     FPSE_04805
Spliceosome [BR:fpu03041]
 Complex B
  Other components
   Prp19-related factors
    FPSE_04805
 Complex C
    FPSE_04805
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_N HAT_PRP39_C TPR_14 Suf Mad3_BUB1_I TPR_8 TPR_15 RPN7 ARM_TT21 AFF4_CHD
Other DBs
NCBI-GeneID: 20363423
NCBI-ProteinID: XP_009256198
UniProt: K3W0Z0
LinkDB
Position
2:complement(7488981..7491573)
AA seq 822 aa
MAPIVPALSWARRQPQLHLVSNEDSVYEQDILRDPGSVKPWLTYIEFKTRHGSILEQAYV
MERACTQLPRSYKLWKLYLSFRVKHVTKLNSALFDKEYRKVNALFEKALNLLHKMPRIWE
MYLRFLTKQPLVTLTRHVFDRALRALPITQHNRIWAIYRPFANSAAGVTAVKIWRRYMQV
HPEDAEDFIELLAQNGLYTEAALKFIEVLNNTRFNSKHGKGHYELWSEMVDLLVAHAADI
ETGHETGIDAERIIRSGISRFADQRGKLWSGLATYWIRRGSFERARDVFEEGITTVMTVR
DFTLIFEAYTEFEESIIGALMEVASGRAEKGVEDENADFELDIRMMRFEQLMDRRPFLLN
DVLLRQNPNNVPEWEKRVALWGDNKKEVAQTYTDAIAAIQPKRAVGAFHQLWTNYAKFYE
RGGDLRNARVIMEKAIKVPFKSVAELADMWIEWAEMELRNENFDDAVRIMAKAVQAPKRS
TVDYFDETLSPQQRVHKSWKLWSFYVDLVESVSTLDETKKVYERIFELRIATPQTVVNYA
NLLEEHKYYEESFKIYERGLDLFSYPVAFELWNLYLTKAADRKIGIERLRDLFEQAVEDC
PPKFAKTIYLMYGNLEEERGLARHAMRIYERATRAVADEDRADMFNFYITKSASNFGLTS
TRPIYERAIAALPDVEAKDMCLKFADMEKRLGEIDRARAIYGHASQFCDPRTSPDFWTKW
EQFEVQHGNEDTFKEMLRIKRSVQAQYNTDVNFIASQALARSQRQPEGAEDAEITDAMAA
LERQSRAPQGFVAASTGPVGGNTATAAIPSNPDAIEIDGVDE
NT seq 2469 nt   +upstreamnt  +downstreamnt
atggccccaatcgttccggccctgagctgggcgcgcaggcagcctcagctgcatctcgtg
tccaatgaagactctgtttacgagcaagacatccttcgcgaccccggtagtgtcaagccg
tggctgacttacatcgaattcaaaacccggcacggttcgatactcgagcaagcatatgtg
atggagcgggcatgcacccagttacctcgatcatacaagttatggaagttgtatctatca
tttcgagttaagcacgtcaccaagctgaactcagcgttgttcgataaagaataccgcaaa
gtcaacgctctttttgaaaaggctctcaacttgctccacaagatgccacgaatttgggag
atgtatcttcggttcttgacaaagcagccactcgttaccctaacacgacatgtattcgac
cgagccttgcgagctctcccaataacacagcacaaccgaatatgggccatctataggcct
tttgcgaactctgctgctggagtaactgccgtaaaaatctggcgacgctacatgcaggtg
catccggaagatgccgaagactttattgagcttcttgcacaaaatggtctatataccgag
gcagcgctaaagtttatcgaagtcctcaacaataccaggttcaacagcaagcacggtaag
ggccactacgaactctggagtgagatggttgatctgctcgtcgcgcatgcagccgacatc
gaaactggacatgaaacaggaatcgacgctgagcggattattcgaagtggcatctcccgg
tttgctgaccagcgagggaagctctggtctggtctcgccacttactggatccgaaggggg
agctttgaacgggcgcgtgatgtgtttgaggagggcatcactacagtcatgacagttcga
gacttcactttgatcttcgaggcatacactgaattcgaggaatccattattggtgccctg
atggaagttgcatctggacgggctgaaaagggggttgaagatgagaacgcagatttcgag
ttggatatccgaatgatgcgtttcgaacagctaatggataggcgtccattcctcttaaac
gacgttcttttacgccaaaaccccaacaatgtgcctgaatgggagaagcgtgtagctctc
tggggcgataacaagaaagaggttgctcagacatacacagacgccattgcagccattcag
ccaaagcgagccgtgggtgctttccaccaactctggactaattatgccaagttctatgaa
cgtggaggtgatttgaggaacgctcgggtcatcatggaaaaggctatcaaagtccctttc
aaatcagtggcagaactcgccgacatgtggattgaatgggcggaaatggagctgcggaac
gagaacttcgatgatgctgtccgaatcatggcaaaagcagttcaagcgcccaagagatcc
accgttgactatttcgatgagactctatcaccacaacagcgagttcacaaaagctggaaa
ctctggagtttctacgtcgaccttgtcgaaagtgtttcaactctggatgaaactaagaag
gtttacgagcggatatttgagctccgaatcgcgacacctcaaacagttgttaactacgca
aacttgctcgaggagcataaatactatgaagagtcgttcaagatctatgagcgcggcttg
gacctctttagttatcctgtcgcctttgagctttggaacctctatcttaccaaagctgcc
gatcgcaagattggaatcgaacgacttcgagatctcttcgagcaagccgtggaggattgt
cctccgaaattcgcaaagacaatttacctcatgtacggcaatctggaagaggagcgtggc
ttggcgcgacatgccatgcgcatctacgagcgggccacaagggccgttgcagatgaagat
cgagccgatatgtttaacttttatatcaccaaatctgcttccaactttggcttgacatcg
acccggccaatctacgagagagccatcgctgctcttcccgacgtcgaagcaaaggatatg
tgccttaagtttgcagacatggagaagcggttgggcgagattgatagggctcgcgctatc
tatggccacgcgtcgcagttctgcgatcctcgaactagtcctgacttctggacgaagtgg
gagcagttcgaagtacagcatggtaacgaagacactttcaaggaaatgctgcgcattaaa
cgaagtgtacaagcgcagtacaacaccgacgtcaactttattgcctcccaggctctggca
cgcagccagcgtcaacctgagggcgccgaggacgctgagattacagatgccatggcagca
ttggaaaggcagtcaagagcaccacagggatttgtcgcggccagtacgggcccagtagga
ggaaacacagcgacagccgccattccatccaatcccgacgctattgagattgatggcgtt
gatgaatga

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