Fusarium pseudograminearum: FPSE_04889
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Entry
FPSE_04889 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_04889
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_04889
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_04889
Spliceosome [BR:
fpu03041
]
Complex C
Other components
Step II factors
FPSE_04889
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
HA2_N
DEAD
AAA_22
AAA_19
T2SSE
AAA_30
nSTAND3
ABC_tran
AAA_16
SRP54
PhoH
TsaE
Motif
Other DBs
NCBI-GeneID:
20363507
NCBI-ProteinID:
XP_009256282
UniProt:
K3VMI7
LinkDB
All DBs
Position
3:854113..857700
Genome browser
AA seq
1195 aa
AA seq
DB search
MDDLLNLELLSLVSKVTSEVQNHLGVGEKTVAEFLIAKRTECNSFDEFRDNLETSTPGLP
PSLVESIDRLVLALHPKFKGKAKDEQKEHPSRTLQEKEKVFSGLALPDKEPARDDGADAI
DDTLALLEGLEPKAKKEKPTRKRSRSPENDQKESRRRRRDRSRSRERRKRDKYRSRSRSQ
ERGDEDWRDGYRDSRKDRRGRKRHDDDDRFRNAPAPEVDDSPQLHKVYQGHVTGLKDFGC
FVNLHNVKGRVDGLVHVSRMSTGQRVNHPSDLVTQGQEVWVKVTSLDKDQNGRDRVGLSM
KDVDQQNGQDLEPQVRMSTGANMEALGGGARDGFAEPSGMPRNDMGPPRRQKKRMTSPER
WEIRQLIASGVAKASDYPDLEEDYNATLRGDGELELEEDVDIEVREEEPPFLAGQTKQSL
ELSPIRVVKAPDGSMNRAAMSGTNLAKERKELKQQEADAAAKDEPKENLSQQWQDPMADP
DKRKFASDLRNARKNQPAEDVPEWKKAVIPKGQSLGKRTNMSIKDQRESLPVFAFRTQLI
KAVHENQILIVVGETGSGKTTQLTQYLAEAGFANDGMIGCTQPRRVAAMSVAKRVAEEVG
CKLGEEVGYTIRFEDCTSPSTKIKYMTDGMLQREILVDPDMNRYSCIMLDEAHERTIATD
VLFALLKKTLKRRPDMKVIVTSATLDADKFSAYFNECPIFTIPGRTFPVEVLYSREPESD
YLDTALVTVMQIHLTEPKGDILLFLTGQEEIDTACEVLFERMKALGPNVPDLIILPVYAS
LPTEMQSRIFDPAPPGSRKVVIATNIAETSITIDEIYYVVDPGFVKQNAYDPKLGMDSLV
VTPISQAQANQRAGRAGRTGPGKCFRLYTEAAYQSEMLPTTIPEIQRQNLSTTILMLKAM
GINDLLHFDFMDPPPINTMLTALEELYALSALDDEGLLTRLGRKMADFPMEPSLAKVLIA
AVDLDCAEEVLSIVSMLNIPTVFYRPKEKQSQADQKKAKFHDPHGDHLTFLNVYNSWKTS
GYSAPWCFENFIQARSMRRAKDVRDQIVKIMDRYKHPIRSCGRATEKVRRALCAGFFRNA
ARKDPQEGYKTLIEGTPVYLHPSSALFGKQAEWVIYHELVLTSKEYMHCTTSIEPKWLVE
AAPTFFKVAPTDRLSKRKKAERIQPLYNKFATEDDWRLSAQRKGGRGGGGGGTWG
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atggatgacttgctgaatcttgagcttttgtcccttgtttcaaaggtgacatcagaagtg
cagaaccatctgggtgttggcgaaaagactgtagctgaattcctgattgccaaacgtaca
gaatgcaatagtttcgacgaattccgcgataacctcgagacgtccactcccggtttgcct
cctagtcttgttgaaagtatagaccgactggtgctcgctctgcatcccaagtttaaaggc
aaagcaaaagacgaacaaaaagaacacccctcccgaacccttcaagaaaaagaaaaggtc
tttagcggccttgcgctacctgacaaggaacctgcgcgcgacgatggagccgatgccatt
gacgataccctcgcgctcttggagggcctagaaccaaaggcgaaaaaggaaaaacccacg
agaaaacggagccgaagccctgagaacgatcaaaaagagtctaggagaaggcgaagagat
agatcccgctcgagggaacgacgaaaacgagacaagtatcggtcaaggtcacgatcacaa
gaacgaggcgatgaagattggcgcgacggataccgcgattcgcgcaaagatcgacgaggt
cgcaaacgacacgacgatgacgatcgattccgcaacgccccggcgcccgaagtcgatgat
tcaccgcagcttcacaaggtctaccaaggtcatgtcacaggtctgaaagactttggttgc
tttgtcaacttgcataatgtgaaaggacgagttgatggtttggttcacgtgtctcgaatg
tctacagggcagcgcgtcaatcatccttccgatttggtgacgcagggacaggaagtctgg
gtcaaggttacgagtcttgacaaggaccagaacggccgcgatcgagtgggattatcgatg
aaggatgttgatcagcagaacggacaggacctggagccacaggttcgcatgtcgacgggc
gccaacatggaagcactgggaggaggcgcaagggacggatttgcagagccaagcggaatg
cctcgaaacgatatgggtcccccacgacgacaaaagaagcgaatgacttctcctgaaaga
tgggagattcgacaattgatcgcatccggagtggccaaggcttctgattatcccgacctg
gaggaagactacaacgccactctccgcggcgacggcgagctggagctggaagaggatgtc
gacattgaagtccgtgaggaagaaccacctttcttggctggacagacaaagcaatctctg
gagctatccccaattcgcgtcgtcaaggcaccagatggctctatgaaccgagcagcaatg
tcaggcaccaacttggcaaaagaacgcaaggagctgaaacaacaagaggccgatgctgct
gccaaggacgaacctaaagagaacctttctcagcaatggcaggaccccatggccgatccc
gacaagagaaagtttgctagcgatttgcgaaacgctaggaagaaccagcccgctgaggat
gtccccgaatggaaaaaggcagtcattcccaagggacaatcgctgggcaagcgtacaaat
atgagcatcaaggatcagagagagtctctgcctgtgtttgccttccgcactcagctgatc
aaggctgtccacgagaaccagatccttattgttgttggagagacaggatcaggaaagacg
acacaattgacgcaatatcttgctgaagccggcttcgccaacgatggtatgatcggttgt
acacaaccccgtcgtgttgccgccatgtcagtcgccaaacgtgtagctgaggaagtcggc
tgcaagcttggtgaagaggttggatacacgattcgattcgaggattgcaccagcccgtcc
acaaagatcaagtacatgaccgatggtatgcttcagagagagattctggttgacccagac
atgaaccgatactcgtgcatcatgcttgacgaggcccacgaacgtaccattgccactgat
gtactgtttgctctcctcaaaaagaccctcaagcgtcgtcctgatatgaaagtaattgtc
acatcagcgacactcgacgcagacaaattctctgcatactttaacgaatgccccatcttt
actatccccggtcgaacctttcctgtcgaagtgctttactccagggaacctgaatccgat
tacctggatactgcacttgtcacagtcatgcagattcatcttaccgaacccaagggcgat
atccttctcttcttgacaggccaggaagaaattgacacagcctgtgaggtcttgtttgag
agaatgaaagccttggggcccaacgtgccagacttgatcattctacccgtctacgcgtct
cttccaaccgaaatgcagagtcgaattttcgatcccgctccgccaggcagccgcaaggtt
gtcatcgccaccaatattgcagagacatccatcactattgacgagatttactacgtcgtc
gacccaggattcgtaaagcaaaatgcctacgatcccaagcttggtatggactcactggtt
gtcacgcctatttcccaggcccaagcgaatcagagagctggtcgtgctggccgaacaggt
cctggaaagtgtttccgcctgtataccgaggcagcctaccagtctgaaatgcttccgacc
accatccccgaaatccaacgccagaacctgtctactacgattcttatgctcaaagccatg
ggtatcaatgacctcctccactttgactttatggacccgcccccaattaatacaatgctt
accgcgttggaggagctctacgccctcagtgcccttgacgatgaaggtctactcacgcgt
ttgggacgaaaaatggccgatttccctatggaaccttctctcgccaaggttctaatcgct
gctgttgatctcgactgtgccgaggaagtgcttagcattgtttccatgctgaatatcccg
actgtgttttaccgccccaaggagaagcagtcccaggcagaccaaaagaaggcaaagttc
cacgacccccacggcgaccacttgactttccttaatgtgtacaactcttggaaaacgagt
ggctactcagcaccgtggtgttttgagaactttatccaggcgcgatcaatgcgtcgagcc
aaggatgtccgcgatcaaattgtcaagatcatggaccgatacaagcaccctataagatca
tgcggccgcgctacagaaaaagtccgccgggcactctgcgcaggattctttcgcaacgcc
gctcgcaaggacccccaggagggatacaagacccttattgagggtactcccgtctatctg
catcctagctcggcactcttcggcaagcaagccgagtgggtcatttatcacgaacttgtc
ctcactagcaaggagtacatgcactgcacgacgagcattgagccgaaatggctcgttgag
gccgcgcctacatttttcaaggtcgcacctacggataggttgagtaagaggaagaaggcg
gagaggatccagccgctttataataaattcgctacagaagatgattggcgattgagtgcg
cagaggaagggtggtagaggtggtggtggaggaggtacttggggttag
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