Fusarium pseudograminearum: FPSE_05609
Help
Entry
FPSE_05609 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12872
pre-mRNA-splicing factor RBM22/SLT11
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_05609
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_05609
Spliceosome [BR:
fpu03041
]
Complex B
Other components
Prp19-related factors
FPSE_05609
Complex C
FPSE_05609
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STL11_N
RRM_1
RRM_YTH1
RRM_3
Nup35_RRM_2
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
20364227
NCBI-ProteinID:
XP_009257002
UniProt:
K3VII3
LinkDB
All DBs
Position
2:<3324998..>3326180
Genome browser
AA seq
371 aa
AA seq
DB search
MPPQIKQDLNRSGWETTDFPSVCETCLPENPYVKMLKEDYGAECKLCTRPFTVFAWSATR
ANGRKKRTNICLTCARLKNCCQCCMLDLSFGLPIVVRDAALKMVAPGPQSDINREYFAQN
NEQLIEEGKVGQEEYEKTDEKARELLRRLANSKPYFRKGRTIEEGESSKSGNAAVGAGLG
GPGPIRTRDSKAAAAAGAKPGGKGRQVFPSAAQLPPSPRDWQPPADKSIMSLFVTGIEDD
LPEYKLRDFFKAHGKIKSLVCSHMSHCAFVNYETREAAEKAAEACQGRAVIAGCPLRVRW
GQPKAIGTMDKDQRSQMLRDARQRQGGSQGQGSRAAEGSGESTNRPAALPAPVAAPPGAS
DTPAYAALSGD
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atgccaccccagatcaagcaagatcttaaccgctcaggatgggaaaccaccgatttccca
tccgtttgtgagacgtgtctccctgaaaacccttacgttaaaatgctcaaagaggactat
ggcgccgaatgcaaattgtgcaccagaccttttactgtctttgcttggagcgccacgcgc
gccaacggtcgcaagaagcgaaccaacatttgcctaacctgcgcgaggctcaagaactgc
tgccagtgttgcatgctcgatctttcctttggccttcccatcgtcgtacgcgatgccgct
ctcaagatggtcgcccccggccctcagtccgacatcaaccgagaatactttgctcaaaat
aacgaacaactgatcgaggagggaaaggtcggacaagaggaatacgaaaagacagacgag
aaggcgcgtgagctgctacgaagactcgccaacagcaaaccctacttccgcaaaggaagg
actattgaggagggtgaaagctccaagagcggaaacgcagctgttggtgctggcctcggc
ggtccaggccctattcgaacgcgagattccaaggctgccgcagcagcgggagctaaaccc
ggtggtaagggtcgtcaggtgttcccaagtgctgcccagttgcctccgagtccgcgcgac
tggcaaccccccgccgacaagagtatcatgtcgctttttgtgactggtattgaggacgac
ctacccgagtacaagcttagggatttcttcaaggcacacggcaagatcaagagcttggtc
tgctcacacatgtcacactgcgcctttgtcaactacgaaactcgagaggcggccgagaaa
gctgcggaggcatgccagggtcgagctgtgattgctggatgtccgctgcgggttcgatgg
ggacaaccaaaggcaattggtactatggataaagaccaaagaagtcagatgctgcgtgat
gccagacagcgccagggaggttctcaaggtcaaggctcacgagcagcggagggcagtggc
gagtctactaaccggcctgcggctctccctgcccctgtggcagcacctcctggagcttct
gatacccctgcctacgctgctctttctggagactag
DBGET
integrated database retrieval system