Fusarium pseudograminearum: FPSE_05612 Help Entry FPSE_05612        CDS       T03456                                  Name (RefSeq) hypothetical protein   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism fpu  Fusarium pseudograminearum Pathway fpu03018   RNA degradation Brite KEGG Orthology (KO) [BR:fpu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FPSE_05612  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:fpu03019]     FPSE_05612 Enzymes [BR:fpu01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      FPSE_05612 Messenger RNA biogenesis [BR:fpu03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      FPSE_05612   mRNA degradation factors    3'-5' decay     Ski complex      FPSE_05612 SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel MTR4-like_stalk DEXQc_Suv3 ResIII Helicase_C DUF6211 Cut8 Ski2_beta-barrel Motif Other DBs NCBI-GeneID:  20364230 NCBI-ProteinID:  XP_009257005 UniProt:  K3W0K6 LinkDB All DBs Position 2:complement(<3315640..>3319496) Genome browser AA seq 1267 aa AA seqDB search MAAIDALLEGEAQEIGQRQPSIQDPEALKRHLEQLLLSPSPDFSPEWLNRLQQRWDFEAD YTSLYKVAPPHTRTLTRFQRHGLEGRVTGYKNVTVPANSATAKNSTSLSRKPANRADFVR GAAGFFPFAPGGLEGIEATAAFEDSVHTGGIAEPGSTGNKLERVIQLGAEGGLLEIAPGM SRGIDFAKKKTSISQEDANAIKEVLEEEPEEARVGPKGDDEVSPDTATPEPNADSGEDGD DIDDILPVEFPALEPHGVLAASSARKAGREWAHMVDINHDMSNFRELVPDMAREWPFELD TFQKEAVYHLENGDSVFVAAHTSAGKTVVAEYAIALAAKHMTKAIYTSPIKALSNQKFRD FRQTFDEVGILTGDVQINPEASCLIMTTEILRSMLYRGADIIRDVEFVIFDEVHYVNDFE RGVVWEEVIIMLPEHVSLILLSATVPNTKEFASWVGRTKQKDIYVISTPKRPVPLEHYLW AGKDIHKIVDSEKKFIEKGWKDAHFAIQGRDKQKPAETTVATRGGNPRGNQRGGTQRGGR GGGQQQRGGNQQRGRGGPPRASHAPGHMGRGGRAGGFTSVAQDKNLWVHLVQYLKKQTLL PACIFVFSKKRCEENADALSNQDFCTASEKSHIHMIIEKSVARLKPDDRQLPQIVRLREL LSRGIAVHHGGLLPIVKELVEILFAQTLVKVLFATETFAMGLNLPTRTVVFSGYRKHDGH SFRNLLPGEYTQMAGRAGRRGLDTVGSVIIVPPGGLDDAPPVADLRNMILGEPSKLRSQF RLTYNMILNLLRVEALKIEEMIKRSFSEHATQQLLPEHEKDVKLAQADLAKVKRDSCEIC DVSMDECHQASQDFKRLTFDLYKGLLAIPIGRRMFSQHRLVVFNWDGIRSVGILLADGIS NKGTSEDPTLHICAIKSLRDRRDATDQLPFVPTFRKYFHELPKSKKRVQTKTLHVPLSDV ECLTRWVTKGIVPEIFQGGDGYHQAKDRLQELCGSWDDRLEELDLSRIKQLQLQEIVETR VGLIKTISDSPAEKCSEFLKHFAMCHDEWLIKEHISQLKQSLSDQNLQLLPDYEQRVQVL KELGFIDDATRIQLKGKVACEVHSGDELVLTELILDNVLADYEPAEIAALLSAFVFQEKT DMEPSLTGNLERGKETIVSISEKVNDVQTRLQVIQSADDSNDFVSRPRFGLMEVVYEWAR GMSFKNITGLTDVLEGTIVRTITRLDETCREVKNAARIVGDPELYQKMQQAQEMIKRDIT AVASLYM NT seq 3804 nt NT seq  +upstreamnt  +downstreamnt atggctgctatcgatgctctccttgagggagaagctcaagaaatcggccagcgtcaacct tcaatccaggatcctgaggcgctcaagcgtcatctagagcagcttctcctctcgccttcg ccagacttctcaccggaatggctgaaccgtttacaacagcgatgggacttcgaggccgac tacacatctctatacaaagttgcaccaccacatactcgaacactaaccagatttcagcgt catggattggagggtcgcgttacaggctacaagaacgttacagtccctgcaaacagtgcc acagccaagaactcgaccagtctttctagaaagcctgcgaatcgcgccgactttgtgagg ggtgctgccggcttcttcccgttcgcgcctggtggtcttgaaggtattgaagcgacagca gcattcgaggactcagttcacacagggggtatcgcagagccaggcagtactgggaacaaa ctggaacgagtaatacaactcggcgccgaaggtggactgttggagattgctcctggaatg agccgaggtatcgacttcgcgaagaaaaagacaagtattagccaagaggatgcgaatgct atcaaggaagtgctcgaggaggaacccgaggaagccagggttggccccaagggtgacgat gaagtttcaccagacaccgctacgccagagccaaatgcagactccggagaggatggggat gatatcgacgacatcttgccggtagaattccctgctctggagccccatggagtcctcgca gcttcgagtgctcgcaaagctggtcgtgagtgggcgcacatggttgacatcaatcatgac atgtccaatttcagagagctcgtacctgatatggctagagaatggccatttgaactcgac acttttcaaaaggaagcggtataccacctggaaaacggcgattcggtttttgttgcagca catacctcagctggcaagactgtcgtggcagagtatgcgattgcactggctgctaagcat atgacgaaagcaatttatacctcgccgatcaaagcattgagcaaccaaaagttccgcgat ttccgacaaacgtttgatgaggtgggcatcctcactggtgatgttcagatcaaccctgaa gccagctgcctgatcatgacgacggaaattcttcgaagcatgctttatcgaggagctgat attattcgagatgtcgagttcgtcatctttgatgaagtccactacgtcaacgactttgaa cgaggtgttgtctgggaagaagttatcataatgttgcccgagcacgtgtcactcatcctg ctgtcagcgactgttccgaacactaaagaatttgcctcgtgggtcggacggacgaaacaa aaggatatctacgttatctctaccccaaagagacctgtgcctcttgaacattacctttgg gctgggaaagacatccataagattgtggattcggaaaagaagttcatcgaaaagggttgg aaagatgcacactttgctattcagggaagggataagcaaaaacctgcagaaactaccgtt gctacgcgtggaggtaaccctcgtggcaaccaacgcggcggtactcaacgaggagggcga ggtgggggacaacagcaaagaggaggcaatcaacagcgtggtcgcggaggtccaccccgt gcaagtcatgcgcctggtcatatgggtcgtggcggccgtgcaggtggtttcacatctgtt gcgcaggacaagaacctctgggttcatctcgttcaatacctcaagaagcagaccctgctt ccagcctgtatcttcgtgttttcgaagaagcgatgcgaagagaacgctgatgccctcagt aaccaagatttctgcacagcatccgagaaaagccatattcacatgatcatcgaaaagtca gtcgcgcggctgaaaccagatgatagacagcttccgcagattgtcaggctaagggaactg ttgagcagaggcatagctgttcaccatggtggactgttgcccattgtcaaagaattggtc gaaatcctgtttgctcagacactggtgaaagtactgtttgccacagaaacgttcgctatg ggcctgaatcttcctacacgcacagtggtcttctcgggataccgcaaacacgacggacat tcattccggaatttgctacctggagagtacactcaaatggctggtcgagctggtcgtcgt ggtttggacactgttggatctgtcattatcgtaccaccagggggtctcgacgatgcacct cccgttgcagacctgcgcaacatgatcttgggagagccctcaaaactacgctcgcaattc cggttgacatacaacatgatcctgaacctccttcgagtagaagcattgaagattgaggag atgatcaagcgcagtttctctgaacatgccactcagcagttgcttcccgagcatgagaag gatgtgaaactagcacaagcagatctggccaaagtcaagcgggactcttgtgagatatgt gatgtttcaatggacgaatgccaccaagcatctcaggacttcaaaaggctcacattcgac ctatacaagggcctattggccatccctataggacgaagaatgttctcccagcaccgcctt gtggtgtttaattgggatggtattcgctcagttggcattcttctggcagatggaattagc aacaagggcacttcggaagatccaacactccatatatgcgccattaagtcccttcgagac cgacgcgatgccaccgaccagcttccattcgttcctactttccgaaaatacttccatgag ctcccaaagagcaagaagcgagtgcaaactaaaactcttcatgtccctctgagcgacgta gaatgccttacaagatgggtaacaaagggcatcgtccctgagatcttccagggtggagat ggttaccatcaagcgaaggatcgcctccaagaactatgtggctcatgggatgacagattg gaagagcttgatttgtctcgaatcaagcaattacaacttcaggagattgtagagacgagg gttggcttgattaagacgatatcggactcacctgcagagaagtgctcggagtttttgaag catttcgctatgtgtcacgatgagtggctcattaaggaacatatctctcagctgaagcag tcgctatcggaccagaatctgcaacttctgcccgattacgagcagcgagtccaagtgctt aaggagcttggcttcattgatgacgccactcgcattcagctcaagggcaaggttgcgtgt gaagtccattccggtgatgagttggttctcactgaactcattctcgacaacgttcttgcc gactacgaaccagccgaaattgccgccctgttgtccgcttttgtgttccaagaaaagacc gacatggaaccgtctttaactggcaacctcgagcgtggaaaagaaaccattgtctctatt tccgaaaaggtcaacgacgtacaaactcgattgcaggtgatccaatctgctgatgactcc aacgatttcgtgtctcgaccacgattcggcctcatggaagtggtgtacgaatgggctcgg ggcatgagctttaagaacatcaccggcttgaccgacgttctggagggtactattgtgcga acgattacacgactagacgagacatgtcgtgaggtgaagaatgcagccagaatcgtgggt gacccagaactgtaccagaagatgcagcaggctcaggaaatgatcaagagggacatcaca gcagtggcaagtctttacatgtag

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