Fusarium pseudograminearum: FPSE_06156
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Entry
FPSE_06156 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_06156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_06156
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPSE_06156
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
FPSE_06156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RFX_DNA_binding
Motif
Other DBs
NCBI-GeneID:
20364774
NCBI-ProteinID:
XP_009257549
UniProt:
K3VJQ5
LinkDB
All DBs
Position
3:<2701293..>2702795
Genome browser
AA seq
482 aa
AA seq
DB search
MPPPQLRGFGGGPAVAAPYHQGGFPSHGQPQGGMPGANQYMNANAQLGPFSANGNAFTSG
LNSLNTQGFADTGFGSQSARMGFHGPAAALQQSQHGLHQNMLMEHPTIRSQPNKGRIREV
WKHNLHEEMAVLRDLVDKYPYIAMDTEFPGVVSRPMGGFRGKSDYHYQCLRTNVDMLKVI
QIGLTFFNEDGETPPARPTNDLKLGTAAQKAATNAPFPCSWQFNFKFSITDDMYNEKSIE
SLQQAGINFELLDRDGIDPHEFASLLIPSGLVCFDNVRWISFHGGYDFGYLTKLLICLPL
PNDEVDFDHKMKLYFPTTYDVKHLMKHAIRLHNSGLLTPSDPSSAEILQKFEHKSGLENI
AETLKIKRVGNAHQAGSDSLLTGKVFFSMRDKIFAGDIPDEHVGKVWGLGFPDSNSNIIS
MNQQNNNDGQTNGNAPSTPNTTSVGLATTPGPQGHNGILNTGPMTPGGGGGVFGSFAFGG
NR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgccgccgccgcaacttaggggcttcggcggggggcctgctgtagcagcgccatatcac
caaggcggctttccctcccatggccaaccgcagggtggtatgccaggcgcaaaccagtac
atgaacgccaatgcccagcttggacccttctctgccaacgggaatgcgttcacgtctggt
ctcaacagtctcaacactcaaggattcgccgatacaggatttggaagccagagcgcaaga
atgggcttccacggccctgctgccgcactacaacaatcacagcatgggcttcaccagaac
atgttgatggaacaccccacaatcaggtcgcagcctaacaagggcagaatacgggaggtg
tggaaacataacctgcatgaggaaatggccgtgttgcgagatctggtggataagtaccct
tacattgcgatggataccgagtttccgggtgtcgtttcgaggcccatgggaggatttcga
gggaagagcgactaccactaccaatgcctgcgaaccaacgtcgacatgctcaaggtcata
caaataggcctcacattcttcaacgaggatggcgaaaccccaccagcacgaccaacgaac
gacctaaagctcggcacagctgcgcaaaaggctgcaaccaatgctcctttcccttgttcg
tggcagtttaacttcaagttctccataaccgacgatatgtacaacgagaaatcaatcgag
tcgcttcagcaagccggtatcaacttcgaattgcttgatcgcgatggcattgatcctcac
gagttcgcatctctcctcatcccttctggtctagtgtgcttcgacaatgtgaggtggatt
tccttccacggtggttacgatttcggctacctcaccaaacttctgatctgtttaccctta
cctaatgatgaggttgattttgatcacaagatgaaactctatttccccacgacatatgac
gtgaagcatcttatgaagcatgcgatccgactacacaactcgggtctcctcacacccagt
gatcccagtagcgctgagatcctgcaaaagtttgagcacaagtcaggactggaaaatatc
gcagaaaccctcaagattaagcgtgtcggtaatgcgcatcaagcaggctctgactcgctg
ctcaccggaaaggtctttttctctatgcgcgacaagatctttgccggcgacatccctgac
gagcacgttggtaaagtttggggtctcggattccccgactccaactcgaatatcatctcg
atgaaccagcaaaacaacaatgatggccagacaaatggcaacgcacccagcacacccaac
actacgagtgttgggttggctactacacctggaccccaaggccacaacggtatcctcaac
acaggacctatgacgcctggaggaggaggtggtgtatttggcagctttgcttttggtgga
aaccgataa
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integrated database retrieval system