Fusarium pseudograminearum: FPSE_06459
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Entry
FPSE_06459 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12586
exosome complex component RRP43
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_06459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_06459
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FPSE_06459
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20365077
NCBI-ProteinID:
XP_009257852
UniProt:
K3VGH2
LinkDB
All DBs
Position
2:complement(1892662..1893672)
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AA seq
336 aa
AA seq
DB search
MASTTGLTRSTFAKLSPHPYLLANLKPSSNDVRPARSNGRASDEVRAPTVNASSLSHANG
SAVVRVGDTTVICGVRAETILTQNIPSYRAANTETELKEYDLLVPNIELATGCAPQFLPG
GPPSTLAQTLSTRIYSLLHSSKIIHPEDLRIWHTAPSEDFEAAEDRMEEDDAETVNENRS
VVAYWVLYIDIFFISFDGNPFDAAWAATMAALRDTKLPGARFDLDREMIICSRKDSRPLS
ITSIPIACTAVVFTGKETDRPTDGEFWMLVDPDRLEESLCDESVTIVVDCKDDDVNILSI
SKHGGIALTPQFLTSEQFLGWATKRWEQFNAAITQS
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaacaacaggacttactcggtcaacttttgccaaactttcacctcatccttat
ctacttgccaacctcaagccctcttccaacgatgtacgcccggctcgaagcaacggccga
gcatcagacgaggtccgcgccccaacagtgaacgcttcgagtttgtcccacgcaaacgga
agtgccgtggtgcgtgtgggcgacacaaccgtcatctgcggtgtgcgagctgagactatc
ctgacccaaaacattccgagctaccgcgctgccaataccgaaaccgagttgaaagagtac
gacctgcttgttcccaacattgagctcgctacaggatgcgcccctcaatttctccctggt
ggcccgccaagcactcttgcgcagactctcagcacacggatatactctctcctccacagc
tccaagattatccaccccgaggatctacgaatatggcacacagcaccctcggaagacttc
gaagctgccgaggatcgcatggaagaggatgatgccgagacagtcaatgagaaccggtct
gttgtggcttactgggtactttacatcgatatcttcttcatttcctttgacggaaaccca
tttgacgccgcttgggctgccaccatggccgcactacgagatacaaagctccccggagct
cgttttgatctggatcgagagatgatcatctgctcccgcaaagattcaaggcctctcagc
atcaccagcattccaatcgcctgcacagcagtcgtcttcactggcaaggaaaccgaccga
cccaccgacggcgagttctggatgctcgtcgatcccgatagactcgaagagtcactttgc
gacgagagtgtgacaattgtggtggattgcaaggacgacgatgtcaacatcttgtccatt
tcaaagcacggaggaattgccttgacccctcagtttctcacatcagaacaattcctgggc
tgggcgacgaagcgatgggaacagttcaacgcggccattactcagtcgtag
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