Entry |
|
Name |
(RefSeq) hypothetical protein
|
KO |
K12586 | exosome complex component RRP43 |
|
Organism |
fpu Fusarium pseudograminearum
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:fpu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_06459
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fpu03019]
FPSE_06459
Messenger RNA biogenesis [BR:fpu03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FPSE_06459
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2:complement(1892662..1893672)
|
AA seq |
336 aa
MASTTGLTRSTFAKLSPHPYLLANLKPSSNDVRPARSNGRASDEVRAPTVNASSLSHANG
SAVVRVGDTTVICGVRAETILTQNIPSYRAANTETELKEYDLLVPNIELATGCAPQFLPG
GPPSTLAQTLSTRIYSLLHSSKIIHPEDLRIWHTAPSEDFEAAEDRMEEDDAETVNENRS
VVAYWVLYIDIFFISFDGNPFDAAWAATMAALRDTKLPGARFDLDREMIICSRKDSRPLS
ITSIPIACTAVVFTGKETDRPTDGEFWMLVDPDRLEESLCDESVTIVVDCKDDDVNILSI
SKHGGIALTPQFLTSEQFLGWATKRWEQFNAAITQS |
NT seq |
1011 nt +upstreamnt +downstreamnt
atggcgtcaacaacaggacttactcggtcaacttttgccaaactttcacctcatccttat
ctacttgccaacctcaagccctcttccaacgatgtacgcccggctcgaagcaacggccga
gcatcagacgaggtccgcgccccaacagtgaacgcttcgagtttgtcccacgcaaacgga
agtgccgtggtgcgtgtgggcgacacaaccgtcatctgcggtgtgcgagctgagactatc
ctgacccaaaacattccgagctaccgcgctgccaataccgaaaccgagttgaaagagtac
gacctgcttgttcccaacattgagctcgctacaggatgcgcccctcaatttctccctggt
ggcccgccaagcactcttgcgcagactctcagcacacggatatactctctcctccacagc
tccaagattatccaccccgaggatctacgaatatggcacacagcaccctcggaagacttc
gaagctgccgaggatcgcatggaagaggatgatgccgagacagtcaatgagaaccggtct
gttgtggcttactgggtactttacatcgatatcttcttcatttcctttgacggaaaccca
tttgacgccgcttgggctgccaccatggccgcactacgagatacaaagctccccggagct
cgttttgatctggatcgagagatgatcatctgctcccgcaaagattcaaggcctctcagc
atcaccagcattccaatcgcctgcacagcagtcgtcttcactggcaaggaaaccgaccga
cccaccgacggcgagttctggatgctcgtcgatcccgatagactcgaagagtcactttgc
gacgagagtgtgacaattgtggtggattgcaaggacgacgatgtcaacatcttgtccatt
tcaaagcacggaggaattgccttgacccctcagtttctcacatcagaacaattcctgggc
tgggcgacgaagcgatgggaacagttcaacgcggccattactcagtcgtag |