Fusarium pseudograminearum: FPSE_06838
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Entry
FPSE_06838 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03022
Basal transcription factors
fpu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPSE_06838
09124 Replication and repair
03420 Nucleotide excision repair
FPSE_06838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpu03021
]
FPSE_06838
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_06838
Transcription machinery [BR:
fpu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPSE_06838
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPSE_06838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-C3HC4
zf-RING_2
zf-C3HC4_2
DUF3797
zf-RING_5
zf-C3HC4_3
zf-RING_10
zf-RING_16
zf-RING_UBOX
MRP-S26
Motif
Other DBs
NCBI-GeneID:
20365456
NCBI-ProteinID:
XP_009258231
UniProt:
K3VZV3
LinkDB
All DBs
Position
4:complement(7406481..7407575)
Genome browser
AA seq
364 aa
AA seq
DB search
MSRAGVSIRHATDLSAPPPPDQDETCPVCKTTRYFNRDMEFRINPECYHRMCKTCVERIF
KDGPNQCPYAGCHKTLRLRGFKTAFFADLTVEREVDIRRRVAAVFNRTEEEFETLDDFNE
YLEMVECLTSDLVYGTDEQKRKAEAQLSEWEAKHKADIERNRRLARESDDARQRRIAAEE
AEARQRRMLERQEELEEKVNAKRFREEMLDSLQSAETGRAAETMDKIMLKKRGQNKRDAA
FGAAGVGSGLSIRGLREKKGPVVDNKPYDPYGGVRVMPDRIDLAPEKLATYSNDWVEITR
TKEAFKAGGYSPDEFLTRALFEAFSGLGVFVDEEKVEKSVSTAAAKEAAATGETGGKMDV
DDPF
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgcgcaggcgtctcaatacgccacgccacagatctcagcgcgcctccaccgccc
gaccaggacgagacatgtcccgtctgcaagacaacccgttatttcaaccgcgacatggag
tttcgcatcaacccggaatgctaccaccgcatgtgcaaaacctgtgtcgagcgcatcttc
aaagacgggcccaaccaatgtccctacgcgggatgccacaagacgctgcgtctgcgcggc
ttcaagacggccttttttgcggacttgaccgtcgagcgagaggtcgatatccggagacga
gtcgcggctgtatttaacaggacggaggaggagtttgagacgttggatgattttaatgag
tacctcgagatggtcgagtgtcttaccagcgatcttgtttacggcaccgacgaacaaaag
cggaaagcagaggcgcaactctcggaatgggaagcaaagcacaaagccgatatcgaacgc
aacagacgattagcacgcgaatcagacgatgctcgccaacgccgcatcgcagcagaggaa
gcagaggcgcgccaacgccgtatgctcgaacgacaagaggaactggaagaaaaggtcaac
gcgaagcgcttccgtgaagagatgctcgactcgctacagagcgcggaaacaggtcgtgcg
gcagagacgatggacaagatcatgctcaagaaaagaggccagaacaaacgcgacgccgcg
ttcggagcagccggcgtcggaagcggactttcgatccgtggactgcgcgagaagaaaggt
cctgtggtggataacaaaccatacgatccctacggtggcgtgcgcgtgatgccggaccgt
atcgaccttgcgcctgagaaactagcgacgtactctaatgactgggtcgagatcacaagg
acaaaggaggcgttcaaggctggtggatatagtcctgatgagtttctcacaagggctctg
ttcgaggcgttttcaggactgggagtgtttgtggatgaggaaaaggttgagaagagtgtt
tctacagcggcagcaaaagaggctgctgcgacaggtgaaacaggtggtaaaatggacgtt
gacgatcccttttaa
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integrated database retrieval system