Fusarium pseudograminearum: FPSE_07873
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Entry
FPSE_07873 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_07873
03041 Spliceosome [BR:
fpu03041
]
FPSE_07873
03036 Chromosome and associated proteins [BR:
fpu03036
]
FPSE_07873
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FPSE_07873
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
FPSE_07873
mRNA cycle factors
Common to processing body (P body) and stress granule
FPSE_07873
Spliceosome [BR:
fpu03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
FPSE_07873
Chromosome and associated proteins [BR:
fpu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
FPSE_07873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
HEM4
Motif
Other DBs
NCBI-GeneID:
20366491
NCBI-ProteinID:
XP_009259266
UniProt:
K3VD65
LinkDB
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Position
2:complement(1959492..1961542)
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AA seq
618 aa
AA seq
DB search
MSDPWGTGDMSEALPATKEADAFPTTEQSTQVQNGDAQAEPPKGYDASRGRWTEPQAFDY
TSLAAGGDTQTWGCSARAYAWQDEYGEVGPKCPDLELELFGEPDTRHERKGLDFSRIESI
EVQQEGPTKIDPIKSFEKGGIHPAMLENIELCGYDVPTPIQKFTIPSILTGHDVIGIAQT
GSGKTAAYLIPILSKLMGKAKKLAATRPNPITFRPGMDEVAAEPLVLIVVPTRELALQIF
NEARKLCYRTMLRPGVVYGGVPISEQISLLSMGCDVLVGTPGRLVDFIQRPRNLTLRRLR
YIVIDEADELLNDDWAEELNPILSGGEQDEGNVKFSLFSATFPKAARDLAKNYLAASHVR
FRVGRAGSTTANIRQIVLQAEGHEKRELLVGLLEEMHGIRTIIFVNSRQSADNLDDFLFN
MKLPVTSMHSDRTQQEREAAMRAFRSGNAPILIATGVTARGIDVQNVMHVINYDLPSIEY
GGIEEYTHRIGRTGRIGHRGVATSLFSERDEPLGSVLTRTLLETDQEIPEFLQQYVPEGD
ARANLKFEADSDFDPNDYAGAGDAGGDAWGAGDGGDTGGDAWGGGGDTGDTGGGDAWSGG
GAGDAWGAAPAPVAVDAW
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacccctggggaactggcgacatgtctgaggcacttcctgccaccaaggaggcc
gatgccttccccaccactgagcagagcacccaggttcagaacggtgacgctcaggccgag
ccccccaagggctatgatgcctcccgtggtcgctggaccgagccccaggcatttgattac
acgtctctggccgctggtggtgacacccagacttggggctgcagtgcccgtgcctacgcc
tggcaggacgagtatggtgaagttggccccaaatgccctgatctcgagctcgagcttttc
ggcgagcctgacactcgtcatgaacgaaaggggcttgatttttctcgaatcgaaagtatc
gaggtccagcaggagggaccgaccaagatcgatcctatcaagtccttcgagaagggtggc
attcatcccgctatgttggagaacatcgagctttgcggatacgatgttcccactcctatc
caaaagttcaccatcccgtctatcctcactggtcatgacgttatcgggatcgctcagaca
ggatctggcaagacagccgcttacctgattcccattttgagcaagctcatgggaaaggcc
aagaagctggctgccactcgcccaaaccccatcactttccgtcccggtatggacgaagtg
gctgctgagcctctcgttttgatcgtcgttccgactcgcgagcttgcgcttcaaatcttc
aacgaggcgcgtaagctgtgctatcgcaccatgctgcgacctggtgttgtgtacggtggt
gtgcctatcagcgagcagatttcactcctcagcatgggctgtgacgttcttgtcggaacc
cctggacgtcttgttgacttcattcagcgacctcgaaacctcaccctccgccgtctgcgc
tacatagtcattgatgaagctgatgagcttctgaatgatgactgggccgaggaactgaac
ccgatcctgtcgggtggcgagcaggatgaaggaaacgtcaagttcagcttgttttcggct
accttcccgaaggccgcccgtgaccttgccaagaactacctggctgcttcccatgtccgt
ttccgtgttggtcgtgctggcagcacgaccgccaacatccggcagatcgtcctccaagct
gagggtcatgaaaagcgagagcttctggtcggtttacttgaggaaatgcacggcattcgc
actatcatctttgtcaacagccgtcagtccgcagacaacctcgatgattttctcttcaac
atgaagctgccggtcacttccatgcacagcgaccgtactcaacaggagcgcgaggccgct
atgcgtgccttccgatcgggcaatgcacctatcctcattgccactggagtcactgcgcgt
ggtatcgacgtccaaaacgtcatgcatgtcatcaactacgacctgccttctattgagtat
ggcggtatcgaggaatacactcaccgcatcggccgaactggccgcatcggacatcgaggc
gtggctacgtccctcttttctgagcgagatgaaccacttggcagcgttctcacccgcacc
ctcctggagactgaccaggaaattcccgagttcttgcagcagtacgtccctgaaggcgat
gcccgcgccaacctcaagttcgaggctgattcggacttcgatcccaacgactatgctggt
gctggagatgctggtggcgatgcttggggagctggtgatggcggtgacaccggcggtgat
gcctggggtggtggtggtgacaccggtgacaccggcggtggtgatgcatggagtggtggt
ggtgctggcgatgcttggggtgctgctcctgcccctgttgccgtcgatgcttggtaa
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