Fusarium pseudograminearum: FPSE_08247
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Entry
FPSE_08247 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_08247
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
fpu03041
]
FPSE_08247
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_08247
Enzymes [BR:
fpu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_08247
Spliceosome [BR:
fpu03041
]
Complex A
U2 snRNP components
U2 related factors
FPSE_08247
Complex B
FPSE_08247
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
FPSE_08247
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
Helicases
FPSE_08247
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
DEAD
WHD_HA2
Motif
Other DBs
NCBI-GeneID:
20366865
NCBI-ProteinID:
XP_009259640
UniProt:
K3VFK6
LinkDB
All DBs
Position
2:<2963429..>2965467
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AA seq
592 aa
AA seq
DB search
MTSQESFNTCRELPMASLQQEFLSAYNKSQVLNIVLFDQHEPAIACTQSLRINAISAAGD
TSRLVYMTDVRLLELAKSDVLFQKYGCIVIDEAHERRLATDVLLALLKSAVTSRLDLKVI
VTSDTANASKFLAYFERGVHFAIPSDSFQVDIRWLLDPDPNFLELAVHTAKHIHETTGDG
DILMFLTGTGEIKSACAQLKNTTKDLDVLTFPQRDNIIKQSSRRRCIITGSSRKWFTPIN
GIVYVIAIDTRFNPRAGLEIQSVAPISQAEARYRARQAGRSGVCYRLYTKSDFDEVLLPT
VLPPILVSDLSELVLQLKAMGINDVANFDFVDKPHPEVFLHALEDLHAMGYLTDVGVITE
RGQKAARLPVHPLWYNALERAHELGCSDELITIAATKSIRNYILTRPPATRQAADLAHQQ
FACPMSDHITELNAFHAYLDTEASSDHSDALQSWCSTAFLSMQALEDVKRIRIKLVESFA
ELFGAPSKRANFESRDYDLGIRKALAWAFVHRVAFRDPKSGSDQYRLFHFNWQAAIHPRS
SLVGLDHQWIVHSTFVYSHRQYFQTVTAIEPEWLISSNVLRDPTTSERRAGR
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacctcccaggagtcgttcaacacctgtcgcgagcttccgatggcttcgttgcagcaa
gagttcctttctgcctataacaaaagtcaagttctcaacattgtcttatttgaccaacat
gaaccagcaatcgcttgtacccagtcgctacgaatcaatgctatcagtgctgcaggggac
acatcacgcctagtatacatgacggacgtgaggctgcttgagctggccaagagcgatgtt
ctcttccagaaatacggatgcatcgtcattgacgaagcacacgaaagaaggttggcaaca
gatgtcctcctagccttgttaaagagtgctgtgacctctcgtctcgacctcaaagtgatc
gttacgtcggacactgcgaatgccagcaagttccttgcatactttgagcgaggagtccac
ttcgcgataccctcggacagttttcaagttgacatccgctggcttctcgatcccgatccc
aacttcttagagctagccgtacacaccgcgaagcatattcatgaaactactggagatgga
gatatcctcatgtttctgacaggtactggcgaaataaagagtgcctgtgctcaactcaaa
aataccacgaaagatctcgatgttcttactttccctcaacgggataatatcatcaaacaa
tctagtcgacgacggtgtatcatcaccggtagctcccgaaagtggttcactccaattaac
ggcatcgtctatgtgatcgcaattgacacccgattcaatccccgcgccggccttgagatt
cagtccgtggcacccatatcacaagccgaagctcgctatcgagctaggcaagccgggaga
tctggtgtatgctatcgcctctacaccaagagtgactttgacgaggtccttcttcctact
gtcctgcccccaattcttgtcagcgacctctcagagcttgtcctacaattaaaggccatg
ggtatcaacgacgttgccaactttgactttgttgataagccccatccagaggtattcctc
catgctcttgaggatctgcatgccatgggctacctcacagatgttggagtcatcaccgaa
aggggtcaaaaggctgcaaggctcccagtacatccgctctggtacaatgcattggaaagg
gcacacgaactcggttgcagcgacgaacttataaccattgctgccacaaaaagcatccgc
aactacatcttgactcggccccctgctactagacaagcagcagacctggcacaccaacaa
ttcgcctgccccatgtctgaccacatcacagaactcaatgcttttcacgcctatctcgac
acagaagcctcgtctgaccactccgatgcgctgcaatcgtggtgctcaaccgcctttctc
agtatgcaggctctggaagacgtcaagagaatccgtataaagctggtggaatcttttgca
gaattatttggggcgccctccaagagggccaactttgagagtcgcgactacgacttgggc
atccgcaaggcactagcctgggcgttcgtccatcgcgtggcctttcgtgaccctaaaagt
ggaagcgatcaatatagattattccatttcaactggcaagccgcgatacatcctagaagc
agtctcgtgggtcttgaccatcagtggatcgtccatagcacttttgtgtactctcaccgt
cagtactttcaaaccgtcactgctatcgaacctgaatggttgatcagctctaatgtactc
agggatccaacaacttccgagaggagagctggcaggtga
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