Fusarium pseudograminearum: FPSE_08901
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Entry
FPSE_08901 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_08901
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_08901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_08901
03041 Spliceosome [BR:
fpu03041
]
FPSE_08901
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPSE_08901
mRNA degradation factors
5'-3' decay
Lsm complex
FPSE_08901
Spliceosome [BR:
fpu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
FPSE_08901
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
FoP_duplication
DUF150_C
Motif
Other DBs
NCBI-GeneID:
20367519
NCBI-ProteinID:
XP_009260294
UniProt:
K3VEA6
LinkDB
All DBs
Position
2:complement(3202429..3202977)
Genome browser
AA seq
131 aa
AA seq
DB search
MSDRPSHRGGRGQGSHPRGGRGGGRGGGAGGAQQERERPKKENILDLGKYMDKQITVKFN
GGREVKGTLKGYDALMNLVLDDVHEVVRDDEGNESTRSLGLVVVRGTLLVLVSPVDGSEE
IANPFVQPEDD
NT seq
396 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatagaccctcacaccgaggtggccgcggccaaggatcacatcctcgaggtgga
cgcggaggcggtcgcggaggaggcgcgggaggcgctcagcaggagcgcgagagacccaag
aaggagaacatccttgacttgggcaagtacatggataagcagatcaccgtcaagtttaac
ggtggccgtgaggtcaagggcacgctgaagggctatgacgctctcatgaacctggttcta
gatgatgtgcatgaggttgttcgagacgacgaaggcaacgagtctactcgatccctcggt
cttgtcgttgtacgaggcaccctccttgttcttgtcagccccgtcgacggcagtgaagaa
attgccaacccttttgtccaacccgaggatgactga
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