Fusarium pseudograminearum: FPSE_09170
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Entry
FPSE_09170 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14327
regulator of nonsense transcripts 2
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03013
Nucleocytoplasmic transport
fpu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
FPSE_09170
03015 mRNA surveillance pathway
FPSE_09170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_09170
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
FPSE_09170
mRNA cycle factors
P-body specific factors
FPSE_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
RseA_C
CBP4
Motif
Other DBs
NCBI-GeneID:
20367787
NCBI-ProteinID:
XP_009260562
UniProt:
K3VYH5
LinkDB
All DBs
Position
1:6306336..6310075
Genome browser
AA seq
1118 aa
AA seq
DB search
MDRARKRELRTLNEKAWDGESDVFPVGKTLDSSLKKNTAFIKRLRTAVTAATLSTFLQEI
RTLSLHKYLSEIISACYEGLCRLKSPGEIEAGVEIVSALHQRFGPSEFTEYLAWLLGKGM
ATPDKGILKSLAPEVREKEEKERITRQRALLRVVTELWLVGVIRTLDDVSKPDDATKGAA
GKTTELKTRTSKASGAEPFPLEVLKDLLGYDREHANLPLLVIFVKSFSWDILGVKPTGAD
GRKTVEEDGSTEGHEAERGDDGENGTSSDEDQPFAEPEMRDRFRSILKKYFDDVKGHIIR
DQKSIQSQARRNAEAYVKSGEVFEDRQANYEKQVKAQERLVSNAQVVADAIGVEMPDLKD
SDDSLAASNGSIGLVKTGDYLRSMGDGAGIWEDDDERRFYENLVDLKGKVPAILLEDGKK
KKTDTDEQVGKKLDPAEVIETTKTAETADDQSTSIANRTIGAQVDALLARLPELTNKDIV
DQTAIDFCFLNSKASRNRLVKALTEVPKGRSDLLPSWSRLVATLGRYMPDVPKGLVDYLD
AEFRSLQRRKEKDFLGQVRLSNIRYLAELTKFGIVPEHVVFHCLKVSLDDFSRMNIEILC
NLIENCGRYLLRNPETAPRMMSFLETLQRKKSVQHIGQPERMLIDNAVYYVDPPERSAIE
QKERTPMELFVRKLIYVDMTKRNYSKILKQIRRLHWEEAEVVAILEKVFSKPGKVKYGSV
HLLGILLSALYRYHPAFVVRVIDNVIESMTFGLEQNDYRFYQRRIAEVKYLGELYNYRML
EHPVIFDTMYKIMTFGYGGPPVPGKYSPLDPPDDFFRIRLVSTMLETCGMFFNRGAAGKK
LDYFLSFFQYYIFTKASLPMDIEFLVHDTFALTRPQWKIASGLEEAIKAFQLAVAQDQKS
AGVDKGVDVDDATSDALSDDDNDEDGDDNDDSASEEDEAEDMEEDSDSDSAFDEEAIVVT
RQEEEVDPEDEADFEREYAKMMAESLESRKFERKQLFDVPLPVRSKTREATSTEGGEGEP
PPSHTMAFSLLTKRGNRQQTRTVELPSNSTFAVAMKNQQQAEREEQQRIKNLVLNYDLQQ
NEDPDGGTDPQLPQLYRNINIHNRNQATNDRRRIITTV
NT seq
3357 nt
NT seq
+upstream
nt +downstream
nt
atggatcgcgcaaggaagcgcgaattgcgcacgctgaatgaaaaggcatgggatggcgaa
tctgacgtattccccgtcggaaagactctcgattcgtccctcaagaagaataccgctttc
atcaaacgattacgaactgctgtcactgctgcaactctcagcacctttctccaggaaata
cgaactctgagcctgcacaagtacctttccgaaatcatatccgcctgctatgaaggcctt
tgtagactcaagtcacccggcgaaatcgaggccggtgtcgagatcgttagtgcgcttcat
cagcgattcggacccagcgagtttacggaatatctagcgtggctgcttggtaagggtatg
gcaactcctgataagggtatcctcaaatctctggcacccgaggttcgcgagaaggaggag
aaggaacgtatcactagacaacgcgcattgcttcgggtggtaacagaactctggcttgtt
ggggttatcaggacactcgacgatgtcagcaagcctgacgacgcgactaagggagctgcc
ggcaaaacaactgaattgaagactcggaccagcaaggcttcaggtgcggaacctttccct
ctcgaagtactaaaggatctactcggatacgaccgcgaacacgcaaacctcccgcttctc
gtcatttttgtcaagtcattcagctgggatattcttggagtaaagccaacaggagccgat
ggccgcaagacagtggaggaagatggctcaacagaaggacacgaagctgagcggggcgat
gacggcgagaatgggacatcctccgacgaagatcagccctttgcggaacccgaaatgcga
gatcgatttaggagtatcctgaaaaagtacttcgacgacgttaaagggcatatcattcgg
gaccagaaatcgatacaatcgcaagctcggcgaaatgctgaagcctatgtgaaatctggg
gaggttttcgaagaccgtcaggcgaattatgagaaacaggtcaaggcccaagaacgtctc
gtatccaacgcccaagtggtcgcagatgccattggcgttgaaatgcccgatttgaaggat
tcggatgattcactcgctgcgtccaacggatccattggtcttgtcaagacgggcgattac
ctgcgttccatgggagacggcgcaggaatctgggaggacgacgacgagcgccgcttctat
gaaaacctagttgacctcaaaggaaaagtaccagctattctgctggaggatggtaaaaag
aagaagacggacacagatgaacaagtgggcaagaaattagacccggccgaagtgatcgaa
accacaaagactgccgaaaccgccgacgatcagtctacatctattgcaaaccgaacaatt
ggtgcgcaagtcgacgctctgcttgctcgcctacctgagttgacaaataaggacattgtt
gaccagacggctatcgacttctgtttcctcaactccaaggcttcgcgcaaccgtctcgtc
aaggccttgactgaagttccaaaaggccgaagcgatttgctgccatcctggtctcgactc
gttgctaccctgggacgatacatgcctgatgttccgaaaggtcttgtcgattacctggat
gctgagttccgaagcttgcaaaggcgaaaagagaaggactttttgggtcaggtccgtctg
agtaatatccgctatcttgctgaattaacaaaatttggcattgttcctgagcatgtcgtc
tttcattgcttgaaggtcagtctcgacgacttttcgcgcatgaatatcgagattctttgc
aaccttatcgagaattgtggtcggtacctgcttcgaaatccggaaacagccccgcgtatg
atgagttttcttgaaactcttcagcgcaagaagtctgttcagcatattggccagccggag
cgcatgcttatcgacaatgccgtctattacgttgatccaccagagcgatcagctatcgag
caaaaggaacgcactcccatggaactcttcgttcgcaaattgatctatgttgatatgacc
aagagaaattatagcaagatcttgaagcagattcgaagacttcactgggaggaagcagag
gtggttgctatcctagaaaaggtgttttccaagcctggaaaggtcaagtacggaagtgtt
cacctccttggaatcctcctcagcgcgctctatcgttatcatcctgcctttgtagtgagg
gtcatcgataacgtgatcgagtcaatgacgtttggtcttgagcagaacgactacagattc
tatcaacgacgcattgctgaagtaaagtatcttggagagctctataactaccgtatgctt
gaacaccctgtcatctttgacactatgtacaagatcatgacgttcggatacggtggacca
cccgttcctggcaaatatagcccactcgacccccccgacgacttcttccgaattcgtctt
gtttccacaatgttagagacatgcggcatgttctttaaccgtggggctgcgggtaagaag
ctggactacttcctctccttcttccagtactacatcttcactaaggcgtctttgcctatg
gatatcgagttcctggtacatgatacatttgctcttacgcgcccacagtggaagattgcc
tcaggattggaggaggcgatcaaagcctttcaacttgctgttgcccaggaccagaagtca
gcaggtgtcgataagggagttgatgtggacgacgcaacaagtgacgccttatctgacgat
gacaatgatgaggatggcgacgacaacgatgatagtgcttcggaggaggatgaagcagaa
gatatggaggaggactctgacagcgatagcgcctttgacgaagaggccattgttgtgacc
cgacaagaagaggaggttgaccccgaagacgaagctgattttgagcgcgaatatgccaaa
atgatggccgaaagtctcgaatcgcgcaaattcgagcgcaagcagctcttcgacgtgccg
cttccagttcggtccaagactcgtgaggcgacttcaacagaagggggtgaaggggagccc
cctcccagccataccatggcattctccctgttgaccaaaagaggcaaccggcaacagacg
cgaactgttgagctgccttctaattcgacatttgccgttgccatgaaaaaccagcaacag
gctgagcgggaagaacagcaacgcatcaagaacttggttctcaattatgatcttcagcaa
aatgaagatccagatggtggtacagaccctcaacttccacaactctatcgaaacatcaat
attcacaacagaaatcaggcaacgaacgaccggcgacgtattatcacaaccgtttag
DBGET
integrated database retrieval system
