Fusarium pseudograminearum: FPSE_09288
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Entry
FPSE_09288 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K27407
RNA-binding protein VTS1
Organism
fpu
Fusarium pseudograminearum
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_09288
04131 Membrane trafficking [BR:
fpu04131
]
FPSE_09288
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
FPSE_09288
Membrane trafficking [BR:
fpu04131
]
SNARE
SNARE associated proteins
Others
FPSE_09288
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_2
SAM_1
SAM_Ribosomal_mS41
Motif
Other DBs
NCBI-GeneID:
20367905
NCBI-ProteinID:
XP_009260680
UniProt:
K3VYF0
LinkDB
All DBs
Position
3:complement(2066872..2068830)
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AA seq
617 aa
AA seq
DB search
MSGNHVIGNRNSTPEANNTSTLRPPSSRAIGSGHSLRASADMASLTGPSPSSRIRPSSDF
YGQAQQNLGPNNAESDSQDKIAQQWIADIDQYETTLEEMAAATLDQDFKDELSAIEQWFR
VLSEAERTAALYALLQQTTQVQIRFFIQVLQQMGKNHPLSGVLSPASFDKDPMSNRLSDA
MNKLNVDSARNSMARSSVIAPSTKRHSGLDPTTISAMFPDAAAAIATEKAKFTQQTGNPP
SSNRNSIALDHRSSMAAPSISAPQDGRDAGPAGSSPWNSGGNGDTSAKASSSQTPMGQFV
QPTPSGGLRSPRPQLSSNNTIQQTTLNAPDKTPADLPLLSPYNAGSGNWASMVNTPMTST
FNAAATGGNQADMVANATAMKLAALSTVNNRFALDDVRKYRRARSNDGTPGQNPVPTGPQ
PGINMPNANVVMINEHGQVLSREQIMALQAQQSLGMGGQRSRPSSPGLAMQPGLAHMAPF
TSPQNNGFLSAYDVSSPLLSAGMQSVNMGSLGMGGHEGYLSDHSDMVRGRSPRGRRGSSK
PPEDPTDPTLLQDIPSWLRSLRLHKYTDNLKDMKWTDLIELDDKALEERGVNALGARRKM
LKVFEQVKEAKADGKLG
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgtctggaaaccacgtcatcggaaacaggaatagcactcccgaggctaacaacacctcg
accttgcgaccgccttcttcgagagctattggctccggacactcacttcgcgcctcagcc
gacatggcatcactcactggcccttctccgtccagccgcattcgaccgtcttcagacttt
tacggtcaggctcagcagaatcttggcccgaacaatgccgagtcagactctcaggacaaa
attgctcagcaatggattgccgacatcgatcagtacgagacgacactggaggagatggct
gccgcgaccctcgatcaggatttcaaggacgagctcagcgccatcgagcaatggttccgt
gtcctgagcgaggccgagcgtactgctgccttgtatgctttgctgcaacagacaacccaa
gtccaaattcgcttcttcatccaggtgctccaacagatgggcaagaatcatccgctatca
ggggtcctctctcctgctagtttcgacaaagatcccatgtccaaccgtcttagtgatgct
atgaacaaactgaatgtcgactctgcccgcaactccatggcgcggagctcggtcatcgcc
ccatcgaccaaacgacactccggactcgatcccacaaccatcagtgccatgttccccgac
gccgcagctgctatcgcgaccgagaaggccaaattcacccagcagactggaaacccacct
tcatcgaaccgcaacagcatcgctctggatcatcgatcatccatggctgccccttccatc
agtgcgccccaggatggtcgtgatgccgggcctgctggttcgtcgccttggaacagtggc
gggaacggagacacctctgccaaagcatcgtctagccagacaccaatgggccaattcgtg
cagccaacaccttcaggtggtcttcgatcaccccgtccccagttgtcgagcaacaatacg
atccagcaaacaaccctcaatgcccctgataaaactcctgcagatctgcctttgctatca
ccctacaacgctggcagcggtaactgggcttccatggtcaacacaccaatgaccagtact
ttcaatgcagctgccactggtggcaaccaagctgacatggttgctaatgccacagccatg
aagcttgcggccctgtcgacagtcaacaaccggttcgcgcttgacgatgtacgaaagtat
cgtcgtgctagatccaatgacggaacaccgggtcaaaaccctgtgcctactggtccccag
cctggcatcaatatgccgaatgctaatgtagtcatgattaacgagcatggacaagtactc
agccgggagcagatcatggctctacaagcgcagcagagcctcggtatgggtggccagcgt
tctcgtcccagctctcctgggctcgccatgcaacctggccttgctcacatggcccctttc
acctcaccgcaaaacaatggcttcctgagcgcatatgatgtgtcatcgccactgttgagc
gctggcatgcaatctgtcaacatgggtagccttggtatgggaggccatgagggttatctg
tcagaccattctgacatggtccgtggacgatctccccgtgggcgtcgaggcagctcgaag
cccccggaggatcctaccgacccaacccttctacaggacatccctagctggctgcgaagt
cttcgtcttcacaaatacaccgacaatctcaaggacatgaagtggacggatctcattgag
ctagacgacaaggcccttgaggagcgcggcgtgaacgctctcggtgcgcgccgaaagatg
ctcaaggtcttcgagcaggtcaaggaagccaaagccgatggaaaactgggctag
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