Fusarium pseudograminearum: FPSE_09623 Help Entry FPSE_09623        CDS       T03456                                  Name (RefSeq) hypothetical protein   KO K10643   CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27] Organism fpu  Fusarium pseudograminearum Pathway fpu03018   RNA degradation Brite KEGG Orthology (KO) [BR:fpu00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     FPSE_09623  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03000 Transcription factors [BR:fpu03000]     FPSE_09623    03019 Messenger RNA biogenesis [BR:fpu03019]     FPSE_09623    04121 Ubiquitin system [BR:fpu04121]     FPSE_09623 Enzymes [BR:fpu01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      FPSE_09623 Transcription factors [BR:fpu03000]  Eukaryotic type   Zinc finger    Cys3His zinc factors     FPSE_09623 Messenger RNA biogenesis [BR:fpu03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      FPSE_09623   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      FPSE_09623 Ubiquitin system [BR:fpu04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     FPSE_09623 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  zf-RING_4 RRM_1 Rtf2 zf-RING_2 SET_assoc Prok-RING_4 zf-UDP Baculo_IE-1 zf-C3HC4 Motif Other DBs NCBI-GeneID:  20368240 NCBI-ProteinID:  XP_009261015 UniProt:  K3V8U2 LinkDB All DBs Position 4:7297661..7303302 Genome browser AA seq 1584 aa AA seqDB search MAPQDSFIDDEEDTCPLCIEEFDLSDRNFRPCPCGYQVCQFCFNNIKNNMNGLCPACRRP YDEKTIQWKVVTTEEVAEFRANIQKNQKKRATDQRQKELQKREAEKENRKNLIGVRVVQK NLVYITGLAPTVREDELLKTLRKPEFFGQYGNIQKISISNRKSSDGQHQSLGIYVTFEYP EEATRCIQAVHGSQNGDRVLKAQHGTTKYCSAWLKNEKCSNPGCMFLHEQGDEEDSYSRQ DLSSMNSIASQRPLPAGGSRSASRQQAPHPTPPPVVSHPMTRSISKEGSESGVDGSALPS SANWARNPQRSRRGSLATSGAASSPAISSAQPVTAEPVPEEAVEDEEEEDEDEEDEEEEE EEPQPEEPEAGPSTSRAMEPESPAPARNVAESGLREILRTLGNCPWPVFSTAGADQYPPL FDPRGGEKRRAMREEEDSRLGGEQEERPEAREPSEGEPETGGSLALGGEPEDRDAPNDNR GFDRRGSTQPPIQRLSTDGLFGPALTGASPFGQSSGNPGSRSMTPQQLFLRSQSGFGDAP PGISSQSNAFQNQNQGQGQGQGHNRQSSRFSFANDNASSTTNVKVSTNPRIMAQQSSMMP NTFQSQGNNQFYGASMPGPPPGLKSTGTPPNMFGQFGGQGFGAPKDNSNELLQSLIGRSR AGNNQSHDAGKREFMISSFSNQYPPSSTSTPAPAPGLLPSLYGGTPSAYQDMSSKQKKKG KKHRHANTSSSGGSGLVDLADPSILQVRMQQHQSQGSGGVGQGLFGGQSQDDELPSLDEA TNSVDALVSDDPILPATTLEGRQSVPPGLGLPPGLAPISRPPSTTGNARLSNVLPALPKI TPPGLTQGASTPDQSPRRLMSATLVSETKKTSKSLATESGLSKEITSQPQPKQTKGINLQ DEEFPALDALKSKSRPATPTPKPTPKAKRNAERIVDRMMAKAGVSKQSSTTEEPKVQDAT VQGAKTQELNPQETKVSESKPMPFTLPTEKKPFSLKTQIEESSTPTQSAKVDGRTPISLN TQIEKNTAPKAGESSATTEKPNTGNAAAFPPLPAPSSAATSSPVTRTGPKTLRVVAAPKT EAPPASPALTTASIALPGSRGVSASYRPDTPASSEAVSDNASVVSNSVTHSRASSPPPSR IGSAAVRATTKSQQRKARKDVLKQETKMIAEAPKVEAEVHAPIIGRKKKQKKEKPVKAPQ SGASTPAAPEPVKAEPTPEPPQPESAKEPEQEPEEKPAKSRTAQKKAAKSKGKAKEVEPE PAAQPPSPAKEATPEAQETTDKPEPNPASVFNEIKNALWTSSVNKLQLFNPIASGSSRTD YSSAHSNANKAEHCKDCSCKCGEIQDDDLAALRAGKPVRKQFHLDGSRMLITPNGDCIRG LNAEEEDAFLELQAAIANTAENPGAFIAPRHQPGSGAFSLIKGRAVPNGRPNIFPTTPQL QSQDPIGKLQREDALSYINQYVLPRLNLGATNMGFPKGASPTKDAAAASLNSLAPYFYGP DAAAGVGIYSPPDGARAMQDFSSAGMSGEERGKNFGMGVGGMPLMSVEDAEGALGTARRE TEKLEKGLNQVIRRNRRIVFGGSN NT seq 4755 nt NT seq  +upstreamnt  +downstreamnt atggcgccccaagattcattcatagatgacgaggaggatacctgccccctctgcatcgag gagtttgatctctcagatcgaaacttccgaccatgtccttgcggctaccaggtctgccag ttttgctttaacaatataaagaataacatgaacggcctatgccccgcctgtcgacgacct tatgacgagaagacgatacagtggaaagttgtcacaacagaagaagttgccgagttccgt gccaacatccagaagaaccaaaagaagcgggctactgatcaacgccagaaagagctgcag aaacgggaagcagagaaagagaaccgcaagaatctcatcggcgtacgagttgtccaaaag aatctggtctatattacaggcctcgctccgaccgtgcgggaagacgagctactcaagaca ctgcgaaagcccgagttctttggccagtacggtaacatccaaaagatttcgattagtaac agaaagagttcggatggccagcaccagtcactaggcatttacgtcacctttgaatatccc gaagaagcgacacgttgcatccaagctgtgcacgggtcacagaacggcgaccgagtcctc aaagcccaacacggtacgacgaaatactgctcagcctggcttaagaatgaaaagtgcagc aaccccggttgtatgttcttacatgaacagggtgacgaggaggacagctattcccggcaa gacctgtcatcgatgaacagtatcgcttcccaacgacccctccctgcaggtggatcacga tctgcttctcggcaacaagctcctcatcccaccccgccacccgttgtatctcatcctatg acacgctccattagtaaggaggggtctgagagcggtgttgacggatcagcattaccttcc tcagccaactgggcacgcaatccgcagcggagccgtaggggcagcctcgctactagtggt gccgcgtcgagccctgccatctcgtcagctcagcctgtaactgctgaaccggttccggaa gaagcagtcgaggatgaagaagaagaggacgaagatgaggaggatgaggaagaagaggaa gaggagcctcaaccagaggaaccggaggccggaccttctacgtcacgcgcgatggaaccc gaatctcctgcaccagccaggaacgtcgccgagagcgggctgagggagattctcaggacc ttgggtaactgtccctggcctgttttctctaccgctggggcagaccagtacccgccattg tttgatcctcgcggaggtgaaaagcgcagagctatgcgagaagaggaggattcacgtctt ggtggtgaacaggaagagcgtcccgaggcccgcgaaccatctgaaggggagcccgaaacc ggcggtagtcttgctctaggaggtgaaccggaggatcgcgacgcccccaacgacaacaga ggcttcgaccgccgaggcagcacccagcctcctattcaacgactctccactgacggcctc tttggacctgcactcaccggagcctcgccttttggtcagagctcgggcaaccctggctcg cggtctatgacaccgcagcaattgtttcttcgatctcagagcggcttcggtgacgccccg cccggcatttctagccaaagcaatgctttccagaaccagaaccagggtcagggacaagga caagggcacaaccgtcagtcgtcccgattcagcttcgccaacgacaacgccagctccaca accaacgtcaaggtttctaccaacccgcgcatcatggctcagcaatcctccatgatgccc aataccttccaatctcaaggcaacaaccagttctacggtgcttccatgcctggacctcct cccggtctcaagtcgaccggcacccctcccaacatgtttggtcagttcggcggacagggc ttcggtgcgccaaaggacaactcgaatgagcttcttcagagtttaatcggccgcagtcgg gctggcaacaaccagtcccacgatgcgggaaagcgtgagtttatgatttcttctttttca aaccagtacccaccatcctctacctccaccccagctcctgctcccgggctcctgccttcg ctgtatggcggtacacctagtgcataccaagacatgagctccaagcagaagaagaaggga aagaagcacagacatgctaacacttcctcttcaggggggagtggcctagtagatcttgca gacccgagtatcctgcaggtgcgaatgcagcagcatcagtctcaaggcagcggcggtgtt ggacagggcttgtttggtggccagagtcaagatgatgagctcccgtccttggacgaggct acgaactctgtcgatgcgttggtttccgacgatccaatcctccctgcgaccacccttgaa ggacggcaatctgtgccccccggcttgggactaccccctgggcttgcacccatttcgaga ccgccgtccaccacaggcaatgcgcgattgagcaacgttctgccagcgttgcccaagata acaccgcctggtctgacgcaaggtgcttcgactccagaccaatcacctagaaggctaatg tcggcaacccttgtctcggaaacgaagaaaacatccaagtctttagcaactgagagtggg ctttcgaaagagatcacgagccagccgcaaccaaagcagaccaagggaatcaacttgcag gacgaggaattcccggctctggatgcactcaagagcaagagccgacctgctacgcctaca cctaagcccactccaaaggccaaacgcaatgcagagagaattgtggatagaatgatggcc aaggcgggggtcagtaagcagagcagcacaacagaagaaccaaaggttcaagatgccacg gttcaaggtgccaaaactcaagagcttaaccctcaggagaccaaggtttcagagtcaaag cctatgccattcactctgcccactgagaagaaaccattttctctcaaaactcagattgag gagagttccacgcccacccaatctgctaaagtggatggtcgaactccaatctctctcaat acacaaatcgaaaagaatactgcacccaaagctggcgaatcatctgcaacgactgagaag cccaacacaggaaacgcagctgctttccccccactacctgcaccttcatcagccgcgacc tcgtctcctgtcacacgaacaggaccgaagacactacgtgtcgttgccgccccgaaaaca gaggccccccctgcatcacccgccttaactacagcatccattgctctaccaggatcgcga ggcgtgtctgctagttacagaccagatacacctgctagtagcgaggcagttagtgacaac gcatcggtcgtatctaactctgtaacacactctcgtgcgagctccccacctcccagtagg attggatctgctgcagtacgagccacaacaaagagccagcaacgcaaggcacgcaaggac gtcttgaaacaggaaaccaagatgattgccgaagcgcctaaagttgaggcagaagtccac gctccgatcattggacgaaagaagaaacagaagaaggaaaagcctgtcaaggcgccacag tctggtgcatccacccccgctgctccagagcctgtcaaggccgaaccaacccccgagcct ccccagccagagtccgccaaggaacctgagcaagagccagaagagaagcctgctaagagc aggacggctcaaaagaaggccgcaaagtccaagggcaaagcaaaagaggtcgagcctgag cctgctgctcaacccccctctcccgccaaggaagccacccctgaagctcaggagaccaca gacaagccggagcctaaccccgcgtcggtctttaatgagatcaagaacgctctttggact tctagcgtgaacaaactgcaacttttcaatcctattgccagtggttcatcgcgcactgat tacagctccgcccatagcaacgctaataaggctgagcattgcaaggactgctcctgcaag tgtggcgaaattcaggatgatgatcttgcagcattgcgggcgggcaaacctgtccgcaaa cagttccacctcgatggtagtcgcatgctcattactcccaatggtgactgcatccgcggc ctgaacgcggaagaagaagatgcttttcttgagctgcaagctgccattgcgaacacggca gagaaccctggagcattcattgcccccagacatcagcctggaagtggagcgttctctttg attaagggcagagccgtccccaatggacgtcccaacatcttccccacaactcctcagctc cagtctcaagaccctatcggaaagcttcagagggaggatgcgctgagctatatcaaccaa tatgtgcttcctcgcttgaacctaggagctactaacatgggattccctaagggtgcatca ccaactaaagatgcggctgctgcaagtcttaactccctcgccccctacttctatggcccc gatgccgctgctggagtgggaatctacagtccccctgatggagcgcgagccatgcaggat ttcagctcagccggtatgtcgggcgaggagcgtggaaagaactttggaatgggcgtcggc ggtatgcccttgatgagcgtggaggatgctgagggtgcgctgggcactgctcggcgggag acagagaagttggagaagggattgaaccaagtcatccgccgcaaccgacgaattgttttt ggaggtagcaactaa

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