KEGG   Fusarium pseudograminearum: FPSE_09826
Entry
FPSE_09826        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12589  exosome complex component RRP42
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_09826
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_09826
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     FPSE_09826
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     FPSE_09826
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 20368443
NCBI-ProteinID: XP_009261218
UniProt: K3UEE6
LinkDB
Position
3:5956959..5958026
AA seq 338 aa
MASQQNLFSPAELAYLHQSLSLHPPIRPDGRSPTQFRPLTAETGVLPGTNGSARVHFADG
TEAIVGVKAEIEKTGGSQEQHDDQDRSRNDWLELAVEIPGQRDDEASTVFLAEMLREALL
ADNEFAKKLRINRRFHWRLYLDVLLISPPLSYPLPLLSLTTHLALLATRLPRLKSEGDED
PMFDDDWESSTFLYPRDGVEAEGSRPPITLLVVAIGDNTIFDPAKEELAVAESALAVSVA
EVRKIKADGEMDVDKKGRELKLLSIRTVDPPSRLTPPGVPHITNNSAQKGEAQTTEGVWK
APLGGTKFGVMDGIIQSVLEKGGVVDEVLDGLEGVELS
NT seq 1017 nt   +upstreamnt  +downstreamnt
atggcgtcgcaacaaaacctcttctcgcccgccgaactcgcatatctgcaccagtcgctc
tctttacaccccccaatccgacccgatggacgcagtcctacgcaatttcgccctttgacc
gcagagacgggtgtacttcccggcacaaatggtagtgcgcgcgtgcatttcgcggacggc
acggaggccattgtaggagtcaaagctgagatcgaaaagacaggaggtagccaggagcag
catgatgaccaagacaggtcaaggaatgattggcttgagctggcagtagagatcccgggt
cagagggatgatgaagcctccacagtgttcttggccgagatgttgagagaagcgttgttg
gccgataatgagtttgccaagaagctgaggatcaacagacggtttcactggaggctatac
cttgatgttcttctaatatctcctccgctgtcataccctctaccgctactctcccttaca
acacatctcgcccttttggctacgcgcctgccccggctcaagtccgagggcgacgaggac
ccgatgtttgacgatgactgggagtcttcaacctttttgtaccctcgcgacggtgtcgaa
gcagagggatctcgaccacctatcacgctactcgtggttgcgattggcgacaacaccatt
ttcgaccctgccaaggaggaactcgctgttgcagagagcgcgctggctgtatccgtggct
gaagtccgaaaaatcaaggcagacggtgaaatggatgttgataagaagggccgcgagctc
aagttgctgtcgattcgaaccgtcgatcctccatcgagattgaccccacctggagtaccg
catatcacgaataactcggctcagaagggtgaagctcaaacgaccgagggtgtctggaag
gcaccactaggtggaaccaagtttggagtaatggatggtataatacagtctgtactggaa
aagggtggtgttgtagacgaggttctggatggtttggagggtgtcgagctctcataa

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