Fusarium pseudograminearum: FPSE_09826
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Entry
FPSE_09826 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12589
exosome complex component RRP42
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_09826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_09826
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
FPSE_09826
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
FPSE_09826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
20368443
NCBI-ProteinID:
XP_009261218
UniProt:
K3UEE6
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All DBs
Position
3:5956959..5958026
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AA seq
338 aa
AA seq
DB search
MASQQNLFSPAELAYLHQSLSLHPPIRPDGRSPTQFRPLTAETGVLPGTNGSARVHFADG
TEAIVGVKAEIEKTGGSQEQHDDQDRSRNDWLELAVEIPGQRDDEASTVFLAEMLREALL
ADNEFAKKLRINRRFHWRLYLDVLLISPPLSYPLPLLSLTTHLALLATRLPRLKSEGDED
PMFDDDWESSTFLYPRDGVEAEGSRPPITLLVVAIGDNTIFDPAKEELAVAESALAVSVA
EVRKIKADGEMDVDKKGRELKLLSIRTVDPPSRLTPPGVPHITNNSAQKGEAQTTEGVWK
APLGGTKFGVMDGIIQSVLEKGGVVDEVLDGLEGVELS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgcaacaaaacctcttctcgcccgccgaactcgcatatctgcaccagtcgctc
tctttacaccccccaatccgacccgatggacgcagtcctacgcaatttcgccctttgacc
gcagagacgggtgtacttcccggcacaaatggtagtgcgcgcgtgcatttcgcggacggc
acggaggccattgtaggagtcaaagctgagatcgaaaagacaggaggtagccaggagcag
catgatgaccaagacaggtcaaggaatgattggcttgagctggcagtagagatcccgggt
cagagggatgatgaagcctccacagtgttcttggccgagatgttgagagaagcgttgttg
gccgataatgagtttgccaagaagctgaggatcaacagacggtttcactggaggctatac
cttgatgttcttctaatatctcctccgctgtcataccctctaccgctactctcccttaca
acacatctcgcccttttggctacgcgcctgccccggctcaagtccgagggcgacgaggac
ccgatgtttgacgatgactgggagtcttcaacctttttgtaccctcgcgacggtgtcgaa
gcagagggatctcgaccacctatcacgctactcgtggttgcgattggcgacaacaccatt
ttcgaccctgccaaggaggaactcgctgttgcagagagcgcgctggctgtatccgtggct
gaagtccgaaaaatcaaggcagacggtgaaatggatgttgataagaagggccgcgagctc
aagttgctgtcgattcgaaccgtcgatcctccatcgagattgaccccacctggagtaccg
catatcacgaataactcggctcagaagggtgaagctcaaacgaccgagggtgtctggaag
gcaccactaggtggaaccaagtttggagtaatggatggtataatacagtctgtactggaa
aagggtggtgttgtagacgaggttctggatggtttggagggtgtcgagctctcataa
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