Fusarium pseudograminearum: FPSE_09829
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Entry
FPSE_09829 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_09829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_09829
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
FPSE_09829
mRNA degradation factors
5'-3' decay
Lsm complex
FPSE_09829
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
20368446
NCBI-ProteinID:
XP_009261221
UniProt:
K3V9C1
LinkDB
All DBs
Position
3:complement(5946388..5947077)
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AA seq
169 aa
AA seq
DB search
MENLSITDAPPQGRGAPQPLPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWD
QFANLVLQSTIERIFAPSPDSAGSDRPTGLYADINHGIFLVRGENVLLLGEIDLDRDDDP
PPGFELAELEVVKKIAEEKKAADKARDKLRVKKLAKHGFEGENIGEIVL
NT seq
510 nt
NT seq
+upstream
nt +downstream
nt
atggagaacctatctatcaccgatgcccctccacagggccgtggtgcgccgcaaccccta
cctcagctgccgccgcaaatgtttacgactgccgcgcagctcctggacctcacagacaag
aagctcatggtcgctttgcgcgatgggcgaaaactcattggagtcctaagaagctgggat
caatttgcaaatcttgttctccaatccacgatcgaacgtatctttgcgccctcccccgac
tcagcaggtagcgatcgaccaaccggtctgtacgcagacataaaccacggcatattcctc
gtccgaggcgagaacgtactactccttggcgaaatcgacctcgacagagacgacgatccc
ccgcctggtttcgagctggccgagttggaagtggttaagaagatcgcagaggagaagaag
gcagccgacaaggctcgggataagttgcgagtgaagaagctcgcgaaacacggcttcgag
ggggagaacattggcgagattgtgctgtag
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