KEGG   Fusarium pseudograminearum: FPSE_09829
Entry
FPSE_09829        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FPSE_09829
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_09829
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     FPSE_09829
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     FPSE_09829
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 20368446
NCBI-ProteinID: XP_009261221
UniProt: K3V9C1
LinkDB
Position
3:complement(5946388..5947077)
AA seq 169 aa
MENLSITDAPPQGRGAPQPLPQLPPQMFTTAAQLLDLTDKKLMVALRDGRKLIGVLRSWD
QFANLVLQSTIERIFAPSPDSAGSDRPTGLYADINHGIFLVRGENVLLLGEIDLDRDDDP
PPGFELAELEVVKKIAEEKKAADKARDKLRVKKLAKHGFEGENIGEIVL
NT seq 510 nt   +upstreamnt  +downstreamnt
atggagaacctatctatcaccgatgcccctccacagggccgtggtgcgccgcaaccccta
cctcagctgccgccgcaaatgtttacgactgccgcgcagctcctggacctcacagacaag
aagctcatggtcgctttgcgcgatgggcgaaaactcattggagtcctaagaagctgggat
caatttgcaaatcttgttctccaatccacgatcgaacgtatctttgcgccctcccccgac
tcagcaggtagcgatcgaccaaccggtctgtacgcagacataaaccacggcatattcctc
gtccgaggcgagaacgtactactccttggcgaaatcgacctcgacagagacgacgatccc
ccgcctggtttcgagctggccgagttggaagtggttaagaagatcgcagaggagaagaag
gcagccgacaaggctcgggataagttgcgagtgaagaagctcgcgaaacacggcttcgag
ggggagaacattggcgagattgtgctgtag

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