Fusarium pseudograminearum: FPSE_09842
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Entry
FPSE_09842 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03022
Basal transcription factors
fpu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
FPSE_09842
09124 Replication and repair
03420 Nucleotide excision repair
FPSE_09842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
fpu03021
]
FPSE_09842
03400 DNA repair and recombination proteins [BR:
fpu03400
]
FPSE_09842
Transcription machinery [BR:
fpu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
FPSE_09842
DNA repair and recombination proteins [BR:
fpu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
FPSE_09842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
TackOD1
Rogdi_lz
Motif
Other DBs
NCBI-GeneID:
20368459
NCBI-ProteinID:
XP_009261234
UniProt:
K3V8N6
LinkDB
All DBs
Position
3:complement(5909172..5910239)
Genome browser
AA seq
355 aa
AA seq
DB search
MDAVDVSEHYEVSTREDTPSLLSIVLDTNPRAWASLNSLLPLSRAIANILVFVNAHLAFS
NANRVALIAAHVDRAEWLYPTPPKPSRDASGDVEMNDASQTQTSANKFPEFAQIETAVLS
GIRKLMDQTKEADLSATTTQISGALTLALCHINKAAQALCSPTANLEDSHKGSSSTSPPT
VRGRILVISVSDSEPSQYIPTMNAVFAAAHTQVAIDTLSLTGEPTFLEQACYNTGGTYLA
ATHPQGLLNYLMFGLMSDTEAREALINSVHDTVDFRAACFCHGRVVDTGFVCSICLSIFC
ETPENSECFTCGTKLSLGNYGAKPAVVPRKKKKKRKVVNGGSREETGSATGTPRP
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcgatgtttcggagcactacgaggtcagcacgcgcgaagacactccctcg
ctactctccatcgtcctcgacacgaaccctcgagcatgggcatccctcaacagcctcctg
ccattgtcgcgcgccatcgccaacattctcgtcttcgtcaacgcccatctcgcttttagc
aacgccaaccgagtggccctgatcgccgctcatgttgaccgcgcagaatggctgtatccg
actccacccaagccctcacgcgacgcctcgggcgatgtcgaaatgaacgacgcttctcaa
acacaaacgtccgcgaacaagttccctgagtttgcgcaaatcgaaaccgctgttctgtct
ggcatacgcaaactcatggatcagaccaaggaagcggacctgtctgctacgacaacccaa
atatctggagctttaacgctggcgctatgccacatcaataaggctgcgcaggctctttgt
tcacccacagccaacttagaggacagccataaaggctcctctagtacatcgcctccgact
gtccgcggccgaatcctcgtcatctctgtatccgactccgagccatcacaatatattccc
accatgaatgctgtctttgcagctgcacatacccaggttgccatcgatactctctcactt
accggcgagccgaccttcctcgaacaagcctgctacaatactggcggtacatacttagcg
gccacacatcctcagggcctactcaactacctcatgttcggtctcatgtctgacacagaa
gctcgcgaagcccttattaactcggtacatgatactgtcgatttccgtgccgcttgcttt
tgtcacggtcgtgttgttgacaccggctttgtctgctcgatctgcctcagcatcttttgt
gagacgccagagaactcggagtgtttcacatgcggaacaaagctgtcactgggcaactat
ggcgctaagcctgccgttgtgccccgtaaaaagaagaagaagcgcaaggtggttaatggt
ggatcacgagaagagacgggaagcgcaacagggacacctcgtccttga
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