Fusarium pseudograminearum: FPSE_10159
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Entry
FPSE_10159 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K12881
THO complex subunit 4
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03013
Nucleocytoplasmic transport
fpu03015
mRNA surveillance pathway
fpu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
FPSE_10159
09122 Translation
03013 Nucleocytoplasmic transport
FPSE_10159
03015 mRNA surveillance pathway
FPSE_10159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
fpu03019
]
FPSE_10159
03041 Spliceosome [BR:
fpu03041
]
FPSE_10159
Messenger RNA biogenesis [BR:
fpu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
FPSE_10159
TREX complex
FPSE_10159
Spliceosome [BR:
fpu03041
]
Complex C
Other components
EJC/TREX
FPSE_10159
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
FPSE_10159
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
FoP_duplication
RRM_PARP14_3
Peptidase_M35
Motif
Other DBs
NCBI-GeneID:
20368776
NCBI-ProteinID:
XP_009261551
UniProt:
K3VXX8
LinkDB
All DBs
Position
3:5796887..5798578
Genome browser
AA seq
253 aa
AA seq
DB search
MSGKLDQALDDITQAQRRGARRRSNPRRAAGRPAAAAPIGGIQKNTKPARGSGAKPAPAK
AAPTNSDSKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSD
GASKAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPTAKSLAERTSQPKAQAKAQPKSAAA
DKHNAGAAKGAAKGAANKKRRGRSSRPAKKTQEELDSEMADYFVAPAAEAAGNTAAPAAA
PAPTADADMDEIA
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcaagctcgaccaagctctcgacgacatcacccaggcccagcgccgtggtgct
cgccgtcgctccaaccctcgccgcgctgccggacgccctgccgcggccgctcctatcggt
ggaatccagaagaacaccaagcccgcacgtggttcaggcgcgaagcccgctccggccaag
gccgctcccaccaacagtgacagcaagatcattgtgagcaatctgcctaaggacgtctcg
gagcagcagattaaggactattttatccagtccgttggacctatcaagcgagtagagctt
gtctacggccccaactcacagagccgcggtgttgccaacgtcaccttccacaagtccgat
ggcgctagcaaggccttccaaaagttgaacggtcttctcgttgacaaccgaccgattaag
attgagatcgtcgtcggagccgcccaggctgacaaggtcattcctaccgccaagagcctc
gctgagcgtactagccagcccaaggcccaagccaaggctcaacccaagtcggctgctgct
gacaagcacaacgccggtgcggccaagggagccgccaagggagctgctaacaagaagcgc
cgtggtcgcagcagccgtcctgccaagaagactcaagaggaactcgactcagagatggct
gattattttgtcgcccctgccgctgaggctgccggcaatactgctgctcctgctgccgca
ccagctcccactgctgatgctgatatggatgagattgcttaa
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