KEGG   Fusarium pseudograminearum: FPSE_10159
Entry
FPSE_10159        CDS       T03456                                 
Name
(RefSeq) hypothetical protein
  KO
K12881  THO complex subunit 4
Organism
fpu  Fusarium pseudograminearum
Pathway
fpu03013  Nucleocytoplasmic transport
fpu03015  mRNA surveillance pathway
fpu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:fpu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    FPSE_10159
  09122 Translation
   03013 Nucleocytoplasmic transport
    FPSE_10159
   03015 mRNA surveillance pathway
    FPSE_10159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:fpu03019]
    FPSE_10159
   03041 Spliceosome [BR:fpu03041]
    FPSE_10159
Messenger RNA biogenesis [BR:fpu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     FPSE_10159
    TREX complex
     FPSE_10159
Spliceosome [BR:fpu03041]
 Complex C
  Other components
   EJC/TREX
    FPSE_10159
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    FPSE_10159
SSDB
Motif
Pfam: RRM_1 RRM_occluded FoP_duplication RRM_PARP14_3 Peptidase_M35
Other DBs
NCBI-GeneID: 20368776
NCBI-ProteinID: XP_009261551
UniProt: K3VXX8
LinkDB
Position
3:5796887..5798578
AA seq 253 aa
MSGKLDQALDDITQAQRRGARRRSNPRRAAGRPAAAAPIGGIQKNTKPARGSGAKPAPAK
AAPTNSDSKIIVSNLPKDVSEQQIKDYFIQSVGPIKRVELVYGPNSQSRGVANVTFHKSD
GASKAFQKLNGLLVDNRPIKIEIVVGAAQADKVIPTAKSLAERTSQPKAQAKAQPKSAAA
DKHNAGAAKGAAKGAANKKRRGRSSRPAKKTQEELDSEMADYFVAPAAEAAGNTAAPAAA
PAPTADADMDEIA
NT seq 762 nt   +upstreamnt  +downstreamnt
atgtctggcaagctcgaccaagctctcgacgacatcacccaggcccagcgccgtggtgct
cgccgtcgctccaaccctcgccgcgctgccggacgccctgccgcggccgctcctatcggt
ggaatccagaagaacaccaagcccgcacgtggttcaggcgcgaagcccgctccggccaag
gccgctcccaccaacagtgacagcaagatcattgtgagcaatctgcctaaggacgtctcg
gagcagcagattaaggactattttatccagtccgttggacctatcaagcgagtagagctt
gtctacggccccaactcacagagccgcggtgttgccaacgtcaccttccacaagtccgat
ggcgctagcaaggccttccaaaagttgaacggtcttctcgttgacaaccgaccgattaag
attgagatcgtcgtcggagccgcccaggctgacaaggtcattcctaccgccaagagcctc
gctgagcgtactagccagcccaaggcccaagccaaggctcaacccaagtcggctgctgct
gacaagcacaacgccggtgcggccaagggagccgccaagggagctgctaacaagaagcgc
cgtggtcgcagcagccgtcctgccaagaagactcaagaggaactcgactcagagatggct
gattattttgtcgcccctgccgctgaggctgccggcaatactgctgctcctgctgccgca
ccagctcccactgctgatgctgatatggatgagattgcttaa

DBGET integrated database retrieval system