Fusarium pseudograminearum: FPSE_11314
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Entry
FPSE_11314 CDS
T03456
Name
(RefSeq) hypothetical protein
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
fpu
Fusarium pseudograminearum
Pathway
fpu03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
fpu00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FPSE_11314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
fpu03009
]
FPSE_11314
Ribosome biogenesis [BR:
fpu03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
FPSE_11314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
ANAPC4_WD40
WDR55
Beta-prop_WDR90_POC16_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Cytochrom_D1
DUF7165
Beta-prop_IFT140_1st
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
20369931
NCBI-ProteinID:
XP_009262706
UniProt:
K3V980
LinkDB
All DBs
Position
3:1098278..1101503
Genome browser
AA seq
1040 aa
AA seq
DB search
MPHNEADHPVVKRQKTVAPANASKSASESSRIFAPFRTVGLVSPTSVPFTSIPLGKTTFQ
ISTSVGRSIQTYDLRRGLNLVFITRPQTPADITATLAWKQQIFAAWGGSTKGEPQGVWIF
QRGKKVNELVLPSDLIEPIQQIHVLGTWTIVAALTRIEIFKTATLEHYTTIHTTPASNRG
NEITGGIVTMPTFLNKIFVGRKDGWVEIWNVSTAKLIYTILPPGPDCGSVTCLEPSPALS
LLAIAYSEGTLIITNVLTDKISLRIEAGSSEAQVNSISFRTDGMGAGNDGRKDGVMATST
AATGDVTFWDLNGGGRVMGVLRSAHNPPSYDGPLVRGGISKVEFLPGQPVVLTSGRDNSL
KSWIFDETPFSPIPRILHSRSGHAGPVNCLQFLPTDFEGADAGNKWLLSGGQDRSLWGWS
LRRDGQSAELSQGNIRKKAKKIGILATNALSHGPTTTLEDLKAPEITCMASSLNRDGGMG
AMPGNQPIWQKSQKKRAHNAEVSGMTGWESVVTAHKNDSYARTWFWGRKRAGRWAFPTGD
DTNVSTVAISPCGTFALVGAESGGIDMYNLQSGNHRQRFPSRLTPAQARQLKMQQLRQAD
DVVQLHMESTRQFPVGTGKHTKRITGLVVDSMNKTVVSCSLDGKIKFWDFLTGNLLEQID
WAPMTFPTGCRYHPASNLLAFSCDDLSIRVVDMETKRTIREFWGPQGAINDFCFSSDGRW
IIAASQDCVIRVWDLPTSHMIDAIRLEKPCKAIAMSVTGEYLAATIENELGVTLWTNKAL
FKHVPTRQISEKEIGHVSAPTVSGENSHGMLEGAFEDEQAEDEDTVVAPTIEQLSADLTT
LSLVPKSRWQTLLHLDLIKERNKPKEAPKAPEKAPFFLPSTTGKDTLMANKEQKGDIKNT
SRVTKLEQARFEQALSSKLRVGAETGNYDEFIEHLKSLSPSSADLELRSLSIGDGDDVPN
ELLHFIRALTARLKTRRDYELTQAWMTVFLRLHFDLVMENQDLLEALSEWKTYQEKECTR
LDGLVGYCSGVVSFLRSPRT
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgcctcataatgaagcagaccaccctgtggtcaagcgccagaagactgtcgcaccagcc
aatgcttcaaagtccgcatcagaatcttctcggatttttgcgcctttccgcactgtcggt
ttagtatctcctaccagtgtccctttcacctcgattcctctcggcaagaccactttccag
atttcgacctccgttggccgatctattcagacctacgatcttcgtcgcggattgaacctc
gttttcatcactcgcccgcagacccccgccgacatcactgcaactctggcctggaagcaa
cagattttcgcagcatggggaggatcaaccaagggcgagcctcagggtgtctggatcttc
cagaggggcaagaaggttaatgagcttgtgctgccctccgacctcatcgagcctatccag
cagatccatgttctaggaacatggactatcgtcgctgctcttacgcgaatcgaaattttc
aagacggccactctggagcactacacaaccatccacaccacgcctgccagcaaccgaggc
aacgaaatcaccggcggtatcgtgactatgcccactttcctcaacaagattttcgtgggt
cgcaaagatggttgggttgagatctggaacgtcagcaccgccaagcttatttacaccatt
ctgcctcccggccccgattgcggttctgtaacatgcttggagcccagtcctgctctgtcc
ttgttggctatcgcctattccgagggaactctgattatcacaaatgttcttactgacaag
atctcgcttcgcatcgaggctggcagctcggaagcgcaagtcaactcgatctctttccga
accgacggtatgggagctggtaacgatggacgaaaggatggtgttatggctacatcgaca
gctgccactggcgatgtcacattctgggatttgaacggcggtggtcgtgttatgggtgtt
ttgcgaagcgcccacaaccctccctcttacgacggacctcttgtccgtggcggtatcagc
aaggtcgagttcctccctggtcaacctgtggtcctgaccagcggtcgcgacaactccctc
aagtcctggatctttgacgaaacccccttctcgcccattccccgaatcctccactcccgc
agtggacatgctggccccgtcaactgccttcagttccttcctaccgatttcgagggtgcc
gatgctggtaacaagtggctgcttagtggtggacaagaccgaagtctttgggggtggagt
ttgcgccgtgatggacagagtgcagagttgagtcagggtaatattcgcaagaaggccaag
aagatcggtattctggctaccaacgccctgtcgcatgggccaacaacgactttggaggac
ctcaaggcccccgaaatcacatgtatggcctcttcactgaaccgagatggtggcatgggt
gccatgcccggtaaccagcctatttggcaaaagtcacagaaaaagagagcgcataatgca
gaggtcagcggtatgaccggctgggagagtgtggtgactgctcacaagaacgattcctat
gccaggacatggttctggggtcgcaagagagcaggtcgatgggctttccctactggagat
gacactaacgtctcgactgttgctatcagcccttgtggtacctttgctcttgttggcgcc
gagtctggtggtatcgatatgtacaatctccagtctggaaaccatcgtcaacgattccct
tcaagactcaccccagcccaagcccgtcagctcaaaatgcaacagctacgacaggcagac
gatgttgtgcaactacacatggagtctacccgccagttccccgtcggcaccggaaagcat
accaagcgaatcaccggtctcgttgttgattcgatgaacaagacagtggtgtcctgctct
ttggatggcaagatcaagttctgggactttttgacaggcaacctgctggaacaaatcgac
tgggcacctatgacatttcccacaggatgcagataccaccccgcgagcaacctccttgcc
ttttcatgcgatgacctgtcgattcgtgtggtggatatggagaccaagcgaactattcga
gagttctggggtcctcagggtgccattaacgatttctgcttctctagcgacggacgatgg
atcatcgcagcctctcaagactgtgtcattcgtgtctgggacctgcctacaagccacatg
atcgatgctatccgactcgagaagccttgcaaagccatagcaatgtccgttaccggtgaa
tacctcgctgcgacaatcgagaacgagttgggcgtgacactctggaccaacaaggctcta
ttcaagcatgttcccacaagacagatctccgaaaaggagatcggccacgtctccgccccc
acagtctctggcgagaacagccatggcatgttggagggtgcatttgaagacgagcaggcc
gaggatgaggataccgtggtggctcctacaatcgagcagctcagcgctgatcttacaacc
ttgtctctggtccccaagagccgctggcaaacactgctacacctggatcttatcaaggag
cgaaacaagcccaaggaagcccccaaggctcctgagaaagctccattcttcctaccttca
acaacaggcaaagataccctcatggcgaacaaggagcagaagggagatattaaaaacaca
tctcgtgtcacgaagcttgagcaggctcgttttgagcaggcccttagttccaagcttcgt
gttggagccgagaccggaaactacgatgaattcatcgagcacctcaagtctctctcccct
tcgagcgcagacctagaactccgctcgctctctattggcgatggcgacgatgttcctaac
gagctgctgcatttcatccgcgctttgacagcccgtctcaagactcgccgagactacgag
ctgacccaggcctggatgactgtgttcctccgacttcactttgatctggtcatggagaac
caggatctactggaggcattgagcgagtggaagacgtatcaagagaaggagtgcacccga
ttggacggtcttgttggatattgcagtggtgtagttagcttcttgaggagtccaaggacg
taa
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