| Entry |
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| Name |
(RefSeq) hypothetical protein
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| KO |
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| Organism |
fpu Fusarium pseudograminearum
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:fpu00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FPSE_11504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:fpu03019]
FPSE_11504
03041 Spliceosome [BR:fpu03041]
FPSE_11504
03009 Ribosome biogenesis [BR:fpu03009]
FPSE_11504
03016 Transfer RNA biogenesis [BR:fpu03016]
FPSE_11504
Enzymes [BR:fpu01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
FPSE_11504
Messenger RNA biogenesis [BR:fpu03019]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
FPSE_11504
Spliceosome [BR:fpu03041]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
FPSE_11504
Complex C
U4/U6.U5 tri-SnRNP related factors
FPSE_11504
Ribosome biogenesis [BR:fpu03009]
Eukaryotic type
Pre-60S particles
Helicases
FPSE_11504
Transfer RNA biogenesis [BR:fpu03016]
Eukaryotic type
tRNA degradation factors
TRAMP complex
FPSE_11504
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
1:5414242..5417575
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| AA seq |
1094 aa
MDELFDVFEGNVEAPSASEDESRQNRKGDKTKKRKANAINGKHGDAEKSEDVDMDNNSTE
ESKDEASSDDESSEESASQQDTKRRKKEDGVGPVMTDTFQTAESREVAGAATFTEQDSSL
VLSHNIQHQVALPPDLDYEYVPLSEHKAPEQPARTWNFKLDPFQSLSVASIEREESILVS
AHTSAGKTVVAEYAIAQCLKRNQRVIYTSPIKALSNQKYRDFEAIFGDVGLMTGDVTINP
TASCLVMTTEILRSMLYRGSEIMREVAWVVFDEIHYMRDKTRGVVWEETIIMLPDKVRYV
FLSATIPNAFQFAEWIAKIHHQACHVVYTDFRPTPLQNYFFPAGGSGARLIVDEKSNFNE
QNFNKVMQEVEEKKGADPNDPNARQKGKGKNKKTNKGGADNGSDIAKIIRMTIKKKFNPV
IVFNFSKRECENMAMNISSLSFNDDSEKAMVRKVFHNAIESLSEQDRELPQIINLLPLLE
RGIGVHHSGLLPILKETIEILFQESLIKVLFATETFSIGLNMPAKTVVFTQVTKWDGVKR
RPLTSSEYIQMAGRAGRRGLDARGIVIMMIDDKLEPDTAKEIVTGHQDRLNSAFYLGYNM
ILNLLRIEAISPEFMLERCFHQFQNAASVPSLEKELMSLQQERDSTTIADESTVKDYYQI
RQQLSAYTRDMRTVIQHPNYSISYLQPGRLVQIYNPKDENESIAGNGTDFGWGVIVNQTP
RRAPKLNEPEYIPQEAHVIDVLLPISRSSADFHPGHPAEEMPPGIKPCNDDDDFKFAVVP
CLLTCIKAISQIRLFLPKEGLKSDSDKDTLTKSLMEVKRRFPDGLPVLDPIENMEITDDS
FKKLLRKIEVLESRLLANPLHLSPLLPSLWDQYHAKVKLTDKVKETKKSIAKAYSIAQMD
ELKSRKRVLRRLGFINDAEVVQLKARVACEVSSTEGHELLLSELLFDRFFNELTPEMCAA
VMSCFIFDEKVEAPALKEELQKPYREIQAKARIIAKVSQECKLDVNEEEYAQKLKWQLME
TVYTWAQGRPFVEICKMTNVYEGSLIRLFRRLEELLRQMAQAAKVMGNEDLTKKFEESLS
KIRRDIVAAQSLYL |
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| NT seq |
3285 nt +upstreamnt +downstreamnt
atggatgaattgtttgatgttttcgagggcaacgtggaggccccgagtgctagcgaggac
gagtcgcgacagaaccgcaagggcgacaagacaaagaagagaaaggccaacgcgataaac
ggcaagcacggcgacgcggaaaagtctgaggatgtcgacatggacaacaacagcaccgag
gaatcaaaggatgaggcatcatccgacgacgagtcttccgaggaaagtgccagccagcag
gacaccaagaggaggaagaaggaggatggtgtaggccctgttatgacagatacgttccag
acggccgagtcaagagaggtcgctggcgcagccacctttacagagcaggattcatctctc
gttttgtcgcacaacattcaacatcaggttgctctacccccggatctagactacgaatac
gtccctctttccgagcacaaggcccccgagcagcccgcgcgaacatggaacttcaagctc
gatcctttccagagtctctccgtagcgtctattgaacgcgaggagagtattcttgtctcc
gcgcatacttctgccggaaaaaccgtcgtcgccgagtacgccatcgcgcaatgtttgaag
cgcaaccagagagtcatctacacaagtcctatcaaggccttgagtaaccaaaagtaccga
gatttcgaagccatttttggagatgttggtctcatgactggagatgttactattaacccc
acagcaagttgcttggtcatgactactgaaattttgcgatctatgttgtatcgaggttcc
gagatcatgcgagaagtcgcctgggtcgtgttcgacgagattcattatatgcgagacaag
acgagaggtgtcgtctgggaggagaccatcatcatgcttcccgacaaggtccgatacgtc
ttcctttctgccaccattcccaacgctttccagttcgccgagtggattgccaagatccat
caccaggcctgtcacgtcgtgtacaccgatttccgaccaactccccttcagaactacttc
ttccctgccggtggcagtggagctagacttatcgtcgacgagaagagcaactttaacgag
caaaacttcaacaaggttatgcaggaggtcgaggagaagaagggcgctgaccccaacgac
cccaacgcgcgacagaaaggaaagggcaagaacaagaagactaacaagggtggcgctgac
aatggctcggatattgccaagatcattcgaatgaccatcaagaagaagttcaaccccgtt
attgtcttcaacttcagcaagcgagagtgcgagaacatggccatgaacatttcgtcactg
agcttcaacgacgattctgaaaaggccatggttcgcaaggttttccacaacgctatagag
agcttgtcagagcaggacagggagcttcctcagattatcaacttgctgcctctgttggag
cgcggtattggtgtccatcactctggtcttctgcccattctcaaggagaccattgagatt
ctgttccaggagtctttgatcaaggttctcttcgccaccgagaccttctccatcggtctc
aacatgcctgccaagactgttgttttcacacaagtcaccaagtgggacggtgtcaagagg
cgtcctcttacttcatccgagtacattcagatggccggtcgtgctggacgtcgtggtctc
gatgcccgtggtattgtcatcatgatgattgacgacaagcttgagcccgatacagccaag
gagattgttaccggacaccaagatcgactcaactctgctttctacctcggctacaacatg
attctgaaccttctccgtatcgaagctatctcgcccgagttcatgttggagcgatgtttc
catcagttccagaacgccgctagcgtcccgtccctggagaaggagttgatgtctttgcag
caggagcgcgacagcaccaccattgccgacgagtccaccgtcaaggattactaccagatt
cgacagcagctcagtgcttacacgagggatatgcgaaccgttattcagcaccccaactac
agtatctcgtaccttcagcctggccgcttggtacagatctacaaccccaaggacgagaac
gagtctattgccggcaacggaaccgactttggctggggtgttattgtcaaccagaccccc
cgtcgtgcccctaagctgaacgagcccgaatatatccctcaggaagctcatgtcattgat
gttctccttcctatttccaggtcaagcgcggatttccacccgggacaccctgctgaggag
atgcctcccggtatcaagccttgcaacgatgacgatgacttcaagttcgcagttgttcct
tgtctgttgacctgcatcaaggcgatcagccagattcgactcttcctgcccaaggaaggc
ctgaagagcgactctgacaaggatacgctcaccaagtccctcatggaggtcaagcgtcgt
ttccctgatggtctccctgtcctggatcctattgagaacatggaaattaccgatgactct
ttcaagaagcttctgcgaaagattgaggttcttgagtctcgacttttggccaaccctctc
cacctttcccctcttctcccttcgctttgggatcagtaccacgccaaggtcaagctcaca
gacaaggtcaaggagacaaagaagtccatcgccaaggcatacagcattgctcagatggac
gagctcaagtcgcgcaagcgtgtcctgcgtcgtctaggcttcatcaacgacgccgaggtc
gttcaactcaaggcccgtgttgcttgtgaggtttcttccaccgagggtcacgagcttctc
ctttccgagttgctctttgaccgattcttcaacgagcttacccccgagatgtgcgctgcc
gtcatgagttgctttatctttgatgagaaggtcgaggcccctgctctcaaggaggagctc
cagaagccctaccgcgagatccaggccaaggcccgcatcattgccaaggtcagccaggag
tgcaagctcgatgtcaatgaggaggaatacgcgcaaaagctcaagtggcagcttatggag
acggtttacacatgggcccaaggtcgtccatttgtcgagatttgcaaaatgacaaatgtc
tacgaaggctcacttatccgtcttttccgtcgtctggaagagcttcttcgacagatggcc
caggctgccaaggtcatgggcaacgaggatctgaccaagaagtttgaggagagtctgtcc
aagatccgcagagatatcgttgccgcccagagtctgtacctataa |
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